DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment VSR7 and Rnf148

DIOPT Version :9

Sequence 1:	NP_001190777.1	Gene:	VSR7 / 827757	AraportID:	AT4G20110	Length:	628	Species:	Arabidopsis thaliana
Sequence 2:	NP_001178011.1	Gene:	Rnf148 / 681407	RGDID:	1595417	Length:	316	Species:	Rattus norvegicus

Alignment Length:	289	Identity:	54/289 - (18%)
Similarity:	92/289 - (31%)	Gaps:	106/289 - (36%)

- Green bases have known domain annotations that are detailed below.

plant    65 GSVVYPDS-KTDGCSAFGKTFKPKFPRPTILLLDRGGCYFALKAWHAQQAGAAAVLV-----ADN 123
            |:||.|:. ..:.||......:|......:.|::||||.|..|...|.:.||..|::     ..|
  Rat    86 GAVVLPEGWNQNACSPLTNFSRPDQADSWLALIERGGCTFTHKINVAAEKGANGVIIYNYPGTGN 150

plant   124 VDEPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGKNIVIKLD----------- 177
            ...|:    |.:.:::         |.:|:|....|.:|....|:|..:.|.::
  Rat   151 KVFPM----SHQGTEN---------IVAVMIGNLKGMELLHLIQQGVYVTIIIEVGRMHMPWLSH 202

plant   178 ---------------------WRESVPHPDKRVEYELWTNSNDECGARCDEQMDFVKNFKGHAQI 221
                                 ||...|:...|.:.::.::               ||...|..|:
  Rat   203 YVMSLFTFLAATVAYLFLYCAWRPRAPNSSTRRQRQIKSD---------------VKKAIGQLQL 252

plant   222 -LEKGGYTAFTPHYITWFCPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKDVVLENLRQL 285
             :.|.|.....|:                :..|:    .|.        :.|:.:||:    |.|
  Rat   253 RVLKEGDKELDPN----------------EDSCV----VCF--------DIYKAQDVI----RIL 285

plant   286 -CVHRVANESSRPWVWWDYVTDFHSRCSM 313
             |.|........||:.      .|..|.|
  Rat   286 TCKHFFHKTCIDPWLL------AHRTCPM 308

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
VSR7	NP_001190777.1	PA_VSR	53..176	CDD:239040	29/116 (25%)
		VESA1_N	<494..>564	CDD:289551
		EGF_CA	517..>545	CDD:238011
Rnf148	NP_001178011.1	PA_GRAIL_like	56..190	CDD:239037	29/116 (25%)
Rnf148	NP_001178011.1	zf-RING_2	267..310	CDD:290367	14/64 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910