DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSR7 and Gas6

DIOPT Version :9

Sequence 1:NP_001190777.1 Gene:VSR7 / 827757 AraportID:AT4G20110 Length:628 Species:Arabidopsis thaliana
Sequence 2:NP_476441.2 Gene:Gas6 / 58935 RGDID:61913 Length:674 Species:Rattus norvegicus


Alignment Length:210 Identity:55/210 - (26%)
Similarity:71/210 - (33%) Gaps:68/210 - (32%)


- Green bases have known domain annotations that are detailed below.


plant   386 RGRLERTAVLKAICA----------------------------GFNETSEP--AIC---LNTGLE 417
            :|.|||..| :.:|:                            |..|...|  |.|   |.....
  Rat    55 QGHLERECV-EEVCSKEEAREVFENDPETDYFYPRYQECMRKYGRPEDKNPNFATCVKNLPDQCT 118

plant   418 TNECLENNGGCWQDTKAN-ITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPARCTMNNGGC 481
            .|.|.:......||...| ...|:|.:.||||:    |.|.               .|:..||||
  Rat   119 PNPCDKKGTQLCQDLMGNFFCLCKDGWGGRLCD----KDVN---------------ECSQKNGGC 164

plant   482 WSDTRNGLTFSACSDSV-STGCKCPEGF--QGDGLTCEDINECKERSVCQCSGCRCKNSWGGYKC 543
                     ...|.:.. |..|.|..||  |.|..:|:||:||.:...  |...||||..|.|.|
  Rat   165 ---------SQVCHNKPGSFQCACHSGFSLQSDNKSCQDIDECTDSDT--CGDARCKNLPGSYSC 218

plant   544 SCSGDRLYINDQDTC 558
            .|.....|.:.:.||
  Rat   219 LCDKGYTYSSKEKTC 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSR7NP_001190777.1 PA_VSR 53..176 CDD:239040
VESA1_N <494..>564 CDD:289551 25/68 (37%)
EGF_CA 517..>545 CDD:238011 12/27 (44%)
Gas6NP_476441.2 GLA 26..90 CDD:214503 6/35 (17%)
EGF_CA 115..150 CDD:238011 9/34 (26%)
FXa_inhibition 157..192 CDD:291342 13/43 (30%)
EGF_CA 194..225 CDD:214542 13/32 (41%)
cEGF 215..238 CDD:289433 6/19 (32%)
FXa_inhibition 244..274 CDD:291342
LamG 295..447 CDD:238058
Laminin_G_2 510..647 CDD:280389
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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