Sequence 1: | NP_001190777.1 | Gene: | VSR7 / 827757 | AraportID: | AT4G20110 | Length: | 628 | Species: | Arabidopsis thaliana |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005263207.1 | Gene: | RNF150 / 57484 | HGNCID: | 23138 | Length: | 460 | Species: | Homo sapiens |
Alignment Length: | 275 | Identity: | 44/275 - (16%) |
---|---|---|---|
Similarity: | 84/275 - (30%) | Gaps: | 115/275 - (41%) |
- Green bases have known domain annotations that are detailed below.
plant 347 PEADTENQV---------LRTEQVSQIGRGNRGD--VTILPTLVINNAQYRGRLERTAVLKAICA 400
plant 401 GFNETSEPAICLNTGLETNECLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTS 465
plant 466 CTPYGPARCTMNNGGCWSDTRNGL-TFSACSDSVSTGCKC--------PEGFQGDGLTCEDINEC 521
plant 522 KERSVCQCSGCRCKNSWGGYKCSCSGDRLYINDQDTCIERYGSKTA---WWLTFLILAIVAVAGL 583
plant 584 AGYIFYKYRFRSYMD 598 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
VSR7 | NP_001190777.1 | PA_VSR | 53..176 | CDD:239040 | |
VESA1_N | <494..>564 | CDD:289551 | 12/77 (16%) | ||
EGF_CA | 517..>545 | CDD:238011 | 3/27 (11%) | ||
RNF150 | XP_005263207.1 | PA_GRAIL_like | 45..215 | CDD:239037 | 31/224 (14%) |
UPF0233 | <229..>254 | CDD:299753 | 7/24 (29%) | ||
zf-RING_2 | 298..341 | CDD:290367 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |