DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSR7 and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_001190777.1 Gene:VSR7 / 827757 AraportID:AT4G20110 Length:628 Species:Arabidopsis thaliana
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:188 Identity:37/188 - (19%)
Similarity:65/188 - (34%) Gaps:57/188 - (30%)


- Green bases have known domain annotations that are detailed below.


plant    15 AALTIIAMVVEARFVVEKESISVLNPEEMRSKHDGSIANFGL-----------------PDYGGF 62
            :|.|:|.:.:.:.|..:.......|..:....::..|.::.:                 .|.|| 
pombe    71 SATTVINLYLPSNFQEDMSGCPNRNDTDASYFYENDIIDYDIEYIEQKSYSSKPSARVQKDDGG- 134

plant    63 LIGSVVYPDSKTDGCSAFGKTFKPKFPRPTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEP 127
                    :||.:....|             ||:.||.|.:..||..||:.|...|:|.||....
pombe   135 --------ESKDEAILDF-------------LLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPS 178

plant   128 ------LLTMDSPEESKDADGFIEKLTIPSVLIDKS----FGDDLRQGFQKGKNIVIK 175
                  ::..|..:||        |:.|||:.:..|    ...||...:::...:..|
pombe   179 SFRLHYMVAPDKVDES--------KVHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYAK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSR7NP_001190777.1 PA_VSR 53..176 CDD:239040 31/150 (21%)
VESA1_N <494..>564 CDD:289551
EGF_CA 517..>545 CDD:238011
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 37/188 (20%)
Peptidases_S8_S53 <144..211 CDD:299169 23/87 (26%)
zf-RING_2 320..362 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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