DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment VSR7 and dsc1

DIOPT Version :9

Sequence 1:	NP_001190777.1	Gene:	VSR7 / 827757	AraportID:	AT4G20110	Length:	628	Species:	Arabidopsis thaliana
Sequence 2:	NP_595266.2	Gene:	dsc1 / 2541251	PomBaseID:	SPBC947.10	Length:	695	Species:	Schizosaccharomyces pombe

Alignment Length:	363	Identity:	62/363 - (17%)
Similarity:	113/363 - (31%)	Gaps:	134/363 - (36%)

- Green bases have known domain annotations that are detailed below.

plant   163 RQGFQKGKNIVIKLDWRESVPHPDKRVEY------ELWTNSN---DECGARCDEQMDFVKNFKGH 218
            ::.|.:.||....     ::|   :|||:      |:|...:   :|...:.|..::......|:
pombe    44 KRAFSEIKNATFL-----NIP---ERVEHSLTFPTEIWETRDGLFEEPVGKGDSHLNHTSVMTGN 100

plant   219 AQILEKGGYTAFTPHYITWFCPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKD------V 277
            ..||....:...:|: :||....:.|    ..||   .||:.|     |..|..:|..      :
pombe   101 WNILPYPSFGKVSPN-VTWHTTLRNI----VMSQ---SGRFSA-----NLYEYVDGNSDGISFVL 152

plant   278 VLENLRQLCVHRVANESSR-----------------------PWVWWDYVTDFHSRCSMKEKKYS 319
            .|||.....|:.:.....|                       ||:             :|:..|.
pombe   153 NLENNNDTSVYHMTFHGDRVKPINVFLGSTDVTPNFGGVDVIPWL-------------LKDSPYK 204

plant   320 ----IDCAESYESLRLFSDLPIEKIKKCIGDPEADTENQVLRTEQVSQIGRGNRGDVTILPTLVI 380
                :|..|.:.   |..:..:|:|:..:.|.:....:.::..|:          :||....:.:
pombe   205 DAPPLDGTEYFP---LLQNRSLERIETRLQDAQTVGWSPLVFEEE----------EVTCSAFVFL 256

plant   381 NNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGL--ETNECLENNGGCWQDTKANITACQDTF 443
            :|.                             ||||  ||.:.:||.  .:.....:.....:.|
pombe   257 HNK-----------------------------NTGLDKETLKAIENE--FYHPQGVSTQKMPEVF 290

plant   444 RGRLCECPVVKGVQYKGD---GYTSCTPYGPARCTMNN 478
                     |.|:.|..|   .:|.....||....:.|
pombe   291 ---------VSGLVYSPDCNVAFTFSNTKGPRNFVLEN 319

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
VSR7	NP_001190777.1	PA_VSR	53..176	CDD:239040	3/12 (25%)
		VESA1_N	<494..>564	CDD:289551
		EGF_CA	517..>545	CDD:238011
dsc1	NP_595266.2	zf-RING_2	632..689	CDD:290367
dsc1	NP_595266.2	zf-rbx1	<633..689	CDD:289448
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910