DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSR7 and Egf

DIOPT Version :9

Sequence 1:NP_001190777.1 Gene:VSR7 / 827757 AraportID:AT4G20110 Length:628 Species:Arabidopsis thaliana
Sequence 2:NP_036974.2 Gene:Egf / 25313 RGDID:2542 Length:1132 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSR7NP_001190777.1 PA_VSR 53..176 CDD:239040
VESA1_N <494..>564 CDD:289551
EGF_CA 517..>545 CDD:238011
EgfNP_036974.2 LDL-receptor class B 1 87..128
LDL-receptor class B 2 129..170
LY 152..193 CDD:214531
LDL-receptor class B 3 171..212
LDL-receptor class B 4 213..259
cEGF 339..360 CDD:403760
FXa_inhibition 361..396 CDD:405372
FXa_inhibition 402..437 CDD:405372
FXa_inhibition 444..477 CDD:405372
LDL-receptor class B 5 484..524
LY 505..547 CDD:214531
LDL-receptor class B 6 525..567
LY 548..590 CDD:214531
LDL-receptor class B 7 568..610
LY 591..634 CDD:214531
LDL-receptor class B 8 611..654
LY 634..677 CDD:214531
LDL-receptor class B 9 655..697
LY 678..719 CDD:214531
FXa_inhibition 746..781 CDD:405372
EGF_CA 839..871 CDD:419698
EGF_CA 873..913 CDD:214542
EGF_3 919..>943 CDD:403986
PHA03099 <974..>1016 CDD:165381
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1068..1096
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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