DRSC/TRiP Functional Genomics Resources

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Protein Alignment VSR7 and T07F12.2

DIOPT Version :9

Sequence 1:NP_001190777.1 Gene:VSR7 / 827757 AraportID:AT4G20110 Length:628 Species:Arabidopsis thaliana
Sequence 2:NP_508831.3 Gene:T07F12.2 / 180762 WormBaseID:WBGene00020322 Length:289 Species:Caenorhabditis elegans


Alignment Length:224 Identity:53/224 - (23%)
Similarity:95/224 - (42%) Gaps:64/224 - (28%)


- Green bases have known domain annotations that are detailed below.


plant    12 FLLAALTIIAMVVEARFVVEKESI--------SVLNPEEM----RSKHDGSIANFGLPDYGGFLI 64
            :||.:..:|..|..|:...|.|.:        :|..|..:    :.||             .|::
 Worm    90 WLLFSFLLIIQVAYAKIPREYEEVENQDNMLFTVTEPYTLAYTYQMKH-------------AFML 141

plant    65 GSVVYPD--SKT------------DGCSAFGKTFKPKFPRPTILLLDRGGCYFALKAWHAQQAGA 115
            | |.:||  :||            .||.|    .:.:...|:::|::||.|.|.:||.:.::|||
 Worm   142 G-VHFPDGANKTFRNLEMVLADPVHGCEA----LRNEIFAPSVILMERGECSFTVKALNGEKAGA 201

plant   116 AAVLVADNVD------EPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGKNIVI 174
            ..::|.|:.:      :..:.| .|:||      :::..:|.|.:....|...|...::|.  .|
 Worm   202 TVIMVTDSQNYEYSYHQYYVNM-IPDES------LDRANVPCVYVAPVTGRYFRDHLEEGG--TI 257

plant   175 KLD---WRESVP--HPDKRVEYELWTNSN 198
            |||   .|...|  |..|:..:|:|.:.:
 Worm   258 KLDIPVERNYAPWVHHQKKAPWEIWPDED 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VSR7NP_001190777.1 PA_VSR 53..176 CDD:239040 33/142 (23%)
VESA1_N <494..>564 CDD:289551
EGF_CA 517..>545 CDD:238011
T07F12.2NP_508831.3 Peptidases_S8_S53 140..263 CDD:299169 35/136 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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