Protein Alignment AT4G10160 and Rnf148

DIOPT Version :9

• Sequence 1: NP_192754.1
• Gene: AT4G10160 / 826607
• AraportID: AT4G10160
• Length: 225
• Species: Arabidopsis thaliana
• Sequence 2: NP_001178011.1
• Gene: Rnf148 / 681407
• RGDID: 1595417
• Length: 316
• Species: Rattus norvegicus
• Alignment Length: 129
• Identity: 35/129 - (27%)
• Similarity: 57/129 - (44%)
• Gaps: 29/129 - (22%)

plant    22 FTFIVCVPICVILIVLLVLYIMRRNSNTNVDWSSLGGFVPTNNNLST-AELGLSKDIRE---MLP 82
            |||:...      :..|.||...|               |...|.|| .:..:..|:::   .|.
  Rat   208 FTFLAAT------VAYLFLYCAWR---------------PRAPNSSTRRQRQIKSDVKKAIGQLQ 251

plant    83 IVIYKE---SFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLI 143
            :.:.||   ....|:..|.||...|:|::.::.: :|.|.||..|||.||.:|.|||:|:..::
  Rat   252 LRVLKEGDKELDPNEDSCVVCFDIYKAQDVIRIL-TCKHFFHKTCIDPWLLAHRTCPMCKCDIL 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT4G10160	NP_192754.1	HRD1	<73..>173	CDD:227568	24/77 (31%)
		RING-H2_EL5_like	96..139	CDD:319375	18/42 (43%)
Rnf148	NP_001178011.1	PA_GRAIL_like	56..190	CDD:239037
		zf-RING_2	267..310	CDD:290367	18/43 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	66	1.000	Domainoid score	I4247
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910