Protein Alignment AT4G10160 and rnf11

DIOPT Version :9

• Sequence 1: NP_192754.1
• Gene: AT4G10160 / 826607
• AraportID: AT4G10160
• Length: 225
• Species: Arabidopsis thaliana
• Sequence 2: NP_001016437.1
• Gene: rnf11 / 549191
• XenbaseID: XB-GENE-852608
• Length: 154
• Species: Xenopus tropicalis
• Alignment Length: 89
• Identity: 26/89 - (29%)
• Similarity: 44/89 - (49%)
• Gaps: 13/89 - (14%)

plant    61 PTNNNLSTAELGLSKDIR--------EMLPIVIY---KESFTVNDTQCSVCLGDYQAEEKLQQMP 114
            |:...|:| :|...:.||        :.||..:|   ::.......:|.:|:.|:...:.::.:|
 Frog    53 PSQTRLAT-QLTEEEQIRIAQRIGLIQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLP 116

plant   115 SCGHTFHMECIDLWLTSHTTCPLC 138
             |.|.:||:|||.||....|||.|
 Frog   117 -CMHIYHMDCIDDWLMRSFTCPSC 139

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT4G10160	NP_192754.1	HRD1	<73..>173	CDD:227568	22/77 (29%)
		RING-H2_EL5_like	96..139	CDD:319375	17/43 (40%)
rnf11	NP_001016437.1	RING-H2_RNF11	98..140	CDD:319382	17/43 (40%)
		RING-H2 finger (C3H2C3-type)	99..139	CDD:319382	16/40 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	65	1.000	Domainoid score	I4324
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	61	1.000	Inparanoid score	I2981
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X150
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.050