DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment AT4G09560 and rnf13

DIOPT Version :9

Sequence 1:	NP_192694.2	Gene:	AT4G09560 / 826540	AraportID:	AT4G09560	Length:	448	Species:	Arabidopsis thaliana
Sequence 2:	NP_957338.1	Gene:	rnf13 / 793981	ZFINID:	ZDB-GENE-040426-772	Length:	377	Species:	Danio rerio

Alignment Length:	382	Identity:	116/382 - (30%)
Similarity:	165/382 - (43%)	Gaps:	78/382 - (20%)

- Green bases have known domain annotations that are detailed below.

plant     9 LSLLLISHLVSAKVLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDACSDLVNTVNVKN 73
            |:||.:...:||  ....|.|. :|||:.|.|...:......|.|..|.|.:||
Zfish    27 LNLLPVEADISA--YSFDNKTE-NFDDLPARFGYRLPSEGLKGFLIGARPENAC----------- 77

plant    74 GTTVSPP----------YVLIIRGGCSFEDKIRNAQKAGYKAAIVY--DYEDFGFLVSMAGNPSG 126
             ..:.||          .|||.|..|:|:.|:.:|||||||||||:  |.:|   |:||......
Zfish    78 -VPIEPPPQRENLSSAFIVLIRRFDCNFDIKVLHAQKAGYKAAIVHNVDSDD---LISMGSEDLD 138

plant   127 VL----IYGTFVSKATGEVLKE-YAGRTDFEVWLMPSFETSAWSIMAISFISLLAMSAVLATCFF 186
            :|    |...|:.:.....||| |.......|.|||.|.... ....|.|:.::.:..:|...|.
Zfish   139 ILKQIDIPSVFIGEEAANSLKEDYIYEKGGHVILMPDFSLPL-EYYLIPFLIIVGICLILIVVFM 202

plant   187 VR-----RHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATTSILCCICLENYEKGDK 246
            :.     |||.||           .|:.|..:.::|...|.    :..:..:|.|||:.||:|::
Zfish   203 ITKFVQDRHRARR-----------SRLRKDQLKKLPIHKFK----KGDSYDVCAICLDEYEEGER 252

plant   247 LRILPCHHKFHVACVDLWLGQRKSFCPVCKR-----------DARSIST---DKPPSEHTPFLSR 297
            ||:|||.|.:|..|||.||.:.|..|||||:           |:.|:.:   |...||:||.|.
Zfish   253 LRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSDGDSESDSDSVDSGGEDNEVSENTPLLR- 316

plant   298 TPSMTPTSSFLLSSSSTTPLQSSHELPIS---IRVDPSLPSTSMQPHTVPMYLSHSR 351
              |:..||:....|.|.:  .|.|:...|   .|.|.|.....:...||.:.|...|
Zfish   317 --SLASTSAHSFGSMSAS--LSQHDAGSSDYDERSDSSDSEEEVTVETVVVQLQQGR 369

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
AT4G09560	NP_192694.2	PA_C_RZF_like	19..163	CDD:239038	52/160 (33%)
AT4G09560	NP_192694.2	zf-RING_2	234..276	CDD:290367	23/41 (56%)
rnf13	NP_957338.1	PA_C_RZF_like	23..180	CDD:239038	55/170 (32%)
rnf13	NP_957338.1	zf-RING_2	238..282	CDD:290367	23/43 (53%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	72	1.000	Domainoid score	I4005
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	138	1.000	Inparanoid score	I2192
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm515
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	8.970