DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT4G09560 and Rnf167

DIOPT Version :9

Sequence 1:NP_192694.2 Gene:AT4G09560 / 826540 AraportID:AT4G09560 Length:448 Species:Arabidopsis thaliana
Sequence 2:NP_081721.1 Gene:Rnf167 / 70510 MGIID:1917760 Length:347 Species:Mus musculus


Alignment Length:351 Identity:105/351 - (29%)
Similarity:158/351 - (45%) Gaps:78/351 - (22%)


- Green bases have known domain annotations that are detailed below.


plant    27 NSTSLSFDDVEATFTPMIKRSDQG--GVLYVAEPLDACSDLVNTVNVKNGTTVSPP--------- 80
            ::.|:.|.|:.|.|...:  ||:|  |.|..|.|.:||           |....||         
Mouse    32 HNASMDFADLPALFGATL--SDEGLQGFLVEAHPENAC-----------GPIAPPPSAPVNGSVF 83

plant    81 YVLIIRGGCSFEDKIRNAQKAGYKAAIVYDYEDFGFLVSMAGN----PSGVLIYGTFVSKATGEV 141
            ..|:.|..|:|:.|:.|||||||.||:|::... ..|::|..|    ...:.|...|:.:.:.|.
Mouse    84 IALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNS-NELLNMVWNSEEIQQQIWIPSVFIGERSAEY 147

plant   142 LKE-YAGRTDFEVWLMP--SFETSAWSIMAISFISLLAMSAVLATCFFVR--RHRVRRRRILALN 201
            |:. :.......|.|:|  ||....:.|.....:.||.::  :.|...||  :||.|.:|     
Mouse   148 LRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRCIQHRKRLQR----- 205

plant   202 GNDFHRMPKSMIIRMPTTIFNGICDEATTSILCCICLENYEKGDKLRILPCHHKFHVACVDLWLG 266
                :|:.|..:.::||..:    .:.....:|.|||:.||.|||||:|||.|.:|..|||.||.
Mouse   206 ----NRLTKEQLKQIPTHDY----QKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLT 262

plant   267 QRKSFCPVCKR--------DARSIST------------DKPPSEHTPFLSRTPSMTPTSSFLLSS 311
            |.:..||:||:        :.:...|            |:|.||.||.|..:|:: |||   ..|
Mouse   263 QTRKTCPICKQPVHRGPGDEEQEEETQEQEEGDEGEPRDQPASEWTPLLGSSPTL-PTS---FGS 323

plant   312 SSTTPLQSSHELPISIRVDPSLPSTS 337
            .:..||    ..| ....|||.||::
Mouse   324 LAPAPL----VFP-GPSTDPSPPSSA 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT4G09560NP_192694.2 PA_C_RZF_like 19..163 CDD:239038 44/153 (29%)
zf-RING_2 234..276 CDD:290367 24/41 (59%)
Rnf167NP_081721.1 PA_C_RZF_like 20..170 CDD:239038 44/151 (29%)
zf-RING_2 228..272 CDD:290367 24/43 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..347 23/83 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 72 1.000 Domainoid score I3995
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 138 1.000 Inparanoid score I2184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - mtm2018
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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