Protein Alignment AT4G09560 and rnf13

DIOPT Version :9

• Sequence 1: NP_192694.2
• Gene: AT4G09560 / 826540
• AraportID: AT4G09560
• Length: 448
• Species: Arabidopsis thaliana
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 357
• Identity: 110/357 - (30%)
• Similarity: 161/357 - (45%)
• Gaps: 72/357 - (20%)

plant     6 IVILSLLLISHLVSAK---VLLIGNSTSLSFDDVEATFTPMIKRSDQGGVLYVAEPLDACSDLVN 67
            :...|.|.:.|||..:   .....::.|.:|||:.|.|...:......|.:..|:|.:||.
 Frog    18 LAFCSCLAVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQ---- 78

plant    68 TVNVKNGTTVSPP-----------YVLIIRGGCSFEDKIRNAQKAGYKAAIVY--DYEDFGFLVS 119
                    .:|||           .|||.|..|:|:.|:.||||||:|||:||  |.:|   |:|
 Frog    79 --------PISPPPLLRDNTSSVFIVLIKRLECNFDLKVLNAQKAGFKAAVVYNVDSDD---LIS 132

plant   120 MAGNPSGVL----IYGTFVSKATGEVLK-EYAGRTDFEVWLMPSFETSAWSIMAISFISLLAMSA 179
            |..|...:|    |...|:.:::...|| |::......:.|:|.. |.......|.|:.::.:..
 Frog   133 MGSNDVDILKQIDIPSVFIGESSARFLKEEFSWEKGGYIVLVPDL-TLPLEYYLIPFLIIVGICL 196

plant   180 VLATCFFVR-----RHRVRRRRILALNGNDFHRMPKSMIIRMPTTIFNGICDEATTSILCCICLE 239
            ||...|.:.     |||.||           :|:.|..:.::|...|.    :.....:|.:||:
 Frog   197 VLIVIFMITKFVQDRHRARR-----------NRLRKDQLKKLPIHKFK----KGDEYDVCAVCLD 246

plant   240 NYEKGDKLRILPCHHKFHVACVDLWLGQRKSFCPVCKR-----------DARSISTDKPPSEHTP 293
            .||:|||||||||.|.:|..|||.||.:.|..|||||:           |:.|...|...||:||
 Frog   247 EYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSESDSDSSQEDNEVSENTP 311

plant   294 FLSRTPSMTPTSSF---LLSSSSTTPLQSSHE 322
            .| |..:...|.||   ..|.|....::||.|
 Frog   312 LL-RPMASASTQSFGAISESHSQQNMMESSGE 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT4G09560	NP_192694.2	PA_C_RZF_like	19..163	CDD:239038	47/164 (29%)
		zf-RING_2	234..276	CDD:290367	25/41 (61%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	51/172 (30%)
		RING_Ubox	239..284	CDD:388418	26/44 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	71	1.000	Domainoid score	I4019
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	146	1.000	Inparanoid score	I2056
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm3637
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.060