DRSC/TRiP Functional Genomics Resources

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Protein Alignment LZTR1 and hcf-1

DIOPT Version :10

Sequence 1:NP_006758.2 Gene:LZTR1 / 8216 HGNCID:6742 Length:840 Species:Homo sapiens
Sequence 2:NP_501279.1 Gene:hcf-1 / 177560 WormBaseID:WBGene00001827 Length:782 Species:Caenorhabditis elegans


Alignment Length:546 Identity:119/546 - (21%)
Similarity:190/546 - (34%) Gaps:167/546 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    31 DHSCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGAR---RSKHTVVAYKDAIYVFGGDNGKTML 92
            |.|.|:..|         :.|.|||.:   .:..|..   |..|..|..|:.|.:|||.| :.|:
 Worm    16 DESRSEEQE---------KNVVRWRIV---QQSTGPNPKPRHGHRAVVLKELIVIFGGGN-EGMI 67

Human    93 NDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKF 157
            ::|..::.:...|......|..|.|.....|:..|:.::.|||.|.  |.    |..|||:|.: 
 Worm    68 DELHAYNTQKREWTAPQCCGDVPTPAAAFGAISLGNKIYRFGGMTE--YG----KYTNDLYELQ- 125

Human   158 ATGQWTEWK-------IEGRLPVARSAHGATV--YSDKLWIFAGYDGNAR---------LNDMWT 204
             :.:| ||:       ..|.||..|..|...|  .|.|.::|.|...:..         |:|::.
 Worm   126 -STRW-EWRRLNPRVHSNGHLPCPRIGHSFVVSQKSQKAYVFGGLSNDLNDPKRNVPHYLDDLYV 188

Human   205 IGLQDRELTCWEEVAQSGEIPPSCCNFPVAVCR----DKMFVFSGQSGAKITNNLFQFEFKDKTW 265
            |.|...:...||::..:|..|.|..:....:..    .:|.|:.|.:|.:: .:|:........|
 Worm   189 INLSGPQHLIWEKLNATGPGPISRESHTAVIYEKDSISRMVVYGGMNGVRL-GDLWYLNLNTLHW 252

Human   266 TRIPTEHLLRGSPPPPQRRYGHTMVAFDRHLYVFGG--------AADNTLPNE------LHCYDV 316
            |.|..:....|.||.|  |..|:.|.....::|:||        :.:.....|      |.|:::
 Worm   253 TEIKFDDPRTGIPPMP--RSLHSSVLIGDKMFVYGGWVPLLEHASTEQQTEKEWKCTSSLGCWNI 315

Human   317 DFQTWEVVQPSSDSEVGGAEVPERACASEEVPTLTYEERVGFKKSRDVFGLDFGTTSAKQPTQPA 381
            ....|               ||.....|:|                                   
 Worm   316 TEDRW---------------VPLHLYCSDE----------------------------------- 330

Human   382 SELPSGRLFHAAAVISDAMYIFGGTVDNNIRSGEMYRFQFSCYPKCTLHEDYGRLWESRQFCD-- 444
            ..:|.||..|.||.:.|.|||:.|      |.|                  |.:.|.::..|.  
 Worm   331 DTIPRGRAGHCAAAVGDRMYIWSG------RDG------------------YRKAWSNQVCCRDM 371

Human   445 --VEFVLGEKEECVQ-GHVAIVTARSRWLRRKITQARERLAQKL------EQEAAPV------PR 494
              ::.:|.|:...|| |.....:....|   .|.|.......::      ||..:|:      ||
 Worm   372 WLLDTILPEQPGKVQLGRAGFNSLEISW---PIVQGASGYFLQIGFGDAKEQSVSPIKRATTSPR 433

Human   495 EAPGVAAGGARPPLLHVAIREAEARP 520
            :.|.:.     ||    :.:|.|..|
 Worm   434 KQPSIV-----PP----SQKETEQSP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LZTR1NP_006758.2 NanM 54..420 CDD:442289 91/404 (23%)
KELCH repeat 68..114 CDD:276965 13/45 (29%)
Kelch 1. /evidence=ECO:0000255 79..128 12/48 (25%)
KELCH repeat 118..172 CDD:276965 16/60 (27%)
Kelch 2. /evidence=ECO:0000255 130..185 19/63 (30%)
Kelch 3. /evidence=ECO:0000255 187..238 11/63 (17%)
Kelch 4. /evidence=ECO:0000255 239..285 12/45 (27%)
KELCH repeat 284..326 CDD:276965 10/55 (18%)
Kelch 5. /evidence=ECO:0000255 295..341 9/59 (15%)
Kelch 6. /evidence=ECO:0000255 399..450 9/54 (17%)
BTB1_POZ_LZTR1 420..571 CDD:349617 22/118 (19%)
BACK1_LZTR1 575..633 CDD:350580
BTB2_POZ_LZTR1 647..772 CDD:349618
BACK2_LZTR1 768..828 CDD:350581
hcf-1NP_501279.1 NanM 35..366 CDD:442289 91/417 (22%)
KELCH repeat 44..89 CDD:276965 13/45 (29%)
KELCH repeat 93..145 CDD:276965 16/60 (27%)
KELCH repeat 212..267 CDD:276965 10/55 (18%)
KELCH repeat 269..334 CDD:276965 14/114 (12%)
FN3 <593..>741 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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