DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT2G46495 and rnf44

DIOPT Version :10

Sequence 1:NP_850456.2 Gene:AT2G46495 / 819259 AraportID:AT2G46495 Length:372 Species:Arabidopsis thaliana
Sequence 2:XP_073777746.1 Gene:rnf44 / 767686 ZFINID:ZDB-GENE-060929-604 Length:500 Species:Danio rerio


Alignment Length:104 Identity:29/104 - (27%)
Similarity:55/104 - (52%) Gaps:24/104 - (23%)


- Green bases have known domain annotations that are detailed below.


plant   292 LDESIIESYK-----KTELGESR----------RLPG--------NNDDIVCPICLSEYASKETV 333
            :|:..:|:|:     ...|||::          :||.        .::..:|.:|.|::.|::.:
Zfish   397 VDDVEMENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLL 461

plant   334 RCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPARQAV 372
            |.:| |:|.||::|:|.|||.:.:||:||...|...:.|
Zfish   462 RVLP-CNHEFHAKCVDKWLKTNRTCPICRADASEVHRDV 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT2G46495NP_850456.2 GUB_WAK_bind 28..93 CDD:464052
COG5219 <200..364 CDD:227544 27/94 (29%)
RING-H2_EL5-like 320..362 CDD:438124 17/41 (41%)
rnf44XP_073777746.1 None
Blue background indicates that the domain is not in the aligned region.

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