Protein Alignment AT2G46495 and Rnf38

DIOPT Version :9

• Sequence 1: NP_850456.2
• Gene: AT2G46495 / 819259
• AraportID: AT2G46495
• Length: 372
• Species: Arabidopsis thaliana
• Sequence 2: NP_604462.2
• Gene: Rnf38 / 171501
• RGDID: 621856
• Length: 623
• Species: Rattus norvegicus
• Alignment Length: 137
• Identity: 37/137 - (27%)
• Similarity: 68/137 - (49%)
• Gaps: 21/137 - (15%)

plant   237 PQVLKIILLSI-----IGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVTTGLDESI 296
            |.:|..:|..:     :||...|...:..|  ..|.:.:|:.....:...:|.      ||.::.
  Rat   494 PSLLPYVLSMLPVPPTVGPTFSFELDVEDG--EVENYEALLNLAERLGEAKPR------GLTKAD 550

plant   297 IESYKKTELGESRRLPGN--NDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCP 359
            ||     :|...|..|.|  ::..:|.:|:.::.|::.:|.:| |:|.||::|:|.|||.:.:||
  Rat   551 IE-----QLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCP 609

plant   360 LCRNSPS 366
            :||...|
  Rat   610 ICRADAS 616

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT2G46495	NP_850456.2	GUB_WAK_bind	28..93	CDD:404778
		COG5219	<200..364	CDD:227544	36/133 (27%)
		RING-H2_EL5_like	319..362	CDD:319375	16/42 (38%)
Rnf38	NP_604462.2	RING-H2_RNF38_like	568..612	CDD:319386	16/44 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	68	1.000	Domainoid score	I4138
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910