Protein Alignment SLIRP and slirp

DIOPT Version :9

• Sequence 1: NP_112487.1
• Gene: SLIRP / 81892
• HGNCID: 20495
• Length: 109
• Species: Homo sapiens
• Sequence 2: XP_002938905.4
• Gene: slirp / 100489427
• XenbaseID: XB-GENE-22069127
• Length: 99
• Species: Xenopus tropicalis
• Alignment Length: 87
• Identity: 48/87 - (55%)
• Similarity: 67/87 - (77%)
• Gaps: 3/87 - (3%)

Human     9 AAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHRGLGWVQFSSEEGL 73
            ||..::|..   .||.|:|||.||.:|||:|:|:|.|::|:||||||||||||..||.|:|||||
 Frog     2 AAPAKKSFE---VFVSRVPWTVASRELKEYFSQYGVVKKCLLPFDKETGFHRGFCWVGFASEEGL 63

Human    74 RNALQQENHIIDGVKVQVHTRR 95
            :||||::.|:::|.|:||...:
 Frog    64 QNALQKDAHLLEGSKLQVQQNK 85

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SLIRP	NP_112487.1	RRM_SLIRP	20..92	CDD:409688	44/71 (62%)
slirp	XP_002938905.4	RRM_SLIRP	10..82	CDD:409688	44/74 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	98	1.000	Domainoid score	I30351
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H12825
Inparanoid	1	1.050	108	1.000	Inparanoid score	I13063
NCBI	1	1.000	-	-
OMA	1	1.010	-	-		QHG49105
OrthoDB	1	1.010	-	-		D1587548at2759
OrthoFinder	1	1.000	-	-		FOG0005633
OrthoInspector	1	1.000	-	-		oto153014
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X8849
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	10.980