Protein Alignment AT2G35420 and Rnf130

DIOPT Version :9

• Sequence 1: NP_181085.2
• Gene: AT2G35420 / 818108
• AraportID: AT2G35420
• Length: 254
• Species: Arabidopsis thaliana
• Sequence 2: XP_038942740.1
• Gene: Rnf130 / 652955
• RGDID: 1562041
• Length: 439
• Species: Rattus norvegicus
• Alignment Length: 187
• Identity: 41/187 - (21%)
• Similarity: 66/187 - (35%)
• Gaps: 68/187 - (36%)

plant    11 PATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVAT--PP 73
            |.|...|.....:.|::|.:             ..:.:|:.|....::|.|     |.|.|  ||
  Rat   141 PVTMTHPGTGDIIAVMITEL-------------RGKDILSYLEKNISVQMT-----IAVGTRMPP 187

plant    74 EN--TGLDPFIIRSFPV----------------FHYSSATKKNHG-------------------- 100
            :|  .|...|:..||.|                ..|::|..:|..
  Rat   188 KNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKK 252

plant   101 ---------TECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCEL 148
                     ..||:|:..:...|.||::. |:|.||.:|:|.|...|.|||:|:..:
  Rat   253 GDKETDPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLNI 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT2G35420	NP_181085.2	zf-RING_2	102..145	CDD:290367	17/42 (40%)
Rnf130	XP_038942740.1	PA_GRAIL_like	40..179	CDD:239037	9/55 (16%)
		HRD1	<197..366	CDD:227568	25/113 (22%)
		RING-H2_RNF130	262..310	CDD:319717	18/48 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	66	1.000	Domainoid score	I4247
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.910