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Protein Alignment AT2G35420 and rnf38
DIOPT Version :9
Sequence 1: | NP_181085.2 |
Gene: | AT2G35420 / 818108 |
AraportID: | AT2G35420 |
Length: | 254 |
Species: | Arabidopsis thaliana |
Sequence 2: | XP_021331935.1 |
Gene: | rnf38 / 566820 |
ZFINID: | ZDB-GENE-030131-8693 |
Length: | 676 |
Species: | Danio rerio |
Alignment Length: | 142 |
Identity: | 33/142 - (23%) |
Similarity: | 63/142 - (44%) |
Gaps: | 28/142 - (19%) |
- Green bases have known domain annotations that are detailed below.
plant 6 SIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGDLIHVA 70
|:..:..|||.|::|:.:.| ....:..::.||| ..:.:..|
Zfish 554 SVLPVQPTAVGPAISLELDV------------DDGEVENYEALLN------------LAERLGEA 594
plant 71 TPPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWF 135
.| .||....|...|.:.::.:..::..|.|.:|:.:|.....:|::. |.|.||:.|:|.|.
Zfish 595 KP---RGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWL 655
plant 136 ELHKTCPVCRCE 147
:.::|||:||.:
Zfish 656 KANRTCPICRAD 667
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X146 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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