DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT2G35420 and mura

DIOPT Version :10

Sequence 1:NP_181085.2 Gene:AT2G35420 / 818108 AraportID:AT2G35420 Length:254 Species:Arabidopsis thaliana
Sequence 2:NP_731367.2 Gene:mura / 41145 FlyBaseID:FBgn0037705 Length:1173 Species:Drosophila melanogaster


Alignment Length:191 Identity:43/191 - (22%)
Similarity:74/191 - (38%) Gaps:42/191 - (21%)


- Green bases have known domain annotations that are detailed below.


plant    15 VFPSVSM-----PVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGD--------- 65
            |.|..|:     ||.:..|.   .:|..||...||..|.|    :.:|......||         
  Fly   979 VLPPQSLAAHQAPVQIQATS---GIINPGFLLNFLAMFPL----SPYNQHDLSSGDTNETENYEA 1036

plant    66 LIHVAT---PPENTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFH 127
            |:.:|.   ..:..||....|...|.:.::........:.|.:|:.:|.....:|::. |.|.||
  Fly  1037 LLSLAERLGEAKPRGLTRNEIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLP-CSHEFH 1100

plant   128 SNCIDLWFELHKTCPVCRCELDPGMIGSGRLESFHNTVTITIQDINHDEENPPTAGSSKRL 188
            :.|:|.|...::|||:||          |....:       ...::..:::..|||::..|
  Fly  1101 AKCVDKWLRSNRTCPICR----------GNASDY-------FDGVDQQQQSQATAGAAAAL 1144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT2G35420NP_181085.2 RING-H2_PA-TM-RING 102..145 CDD:438118 14/42 (33%)
rad18 103..>193 CDD:273165 21/86 (24%)
muraNP_731367.2 RING-H2_RNF38-like 1073..1118 CDD:438135 14/45 (31%)

Return to query results.
Submit another query.