Protein Alignment AT2G35420 and Rnf150

DIOPT Version :10

• Sequence 1: NP_181085.2
• Gene: AT2G35420 / 818108
• AraportID: AT2G35420
• Length: 254
• Species: Arabidopsis thaliana
• Sequence 2: XP_017168354.1
• Gene: Rnf150 / 330812
• MGIID: 2443860
• Length: 450
• Species: Mus musculus
• Alignment Length: 157
• Identity: 42/157 - (26%)
• Similarity: 69/157 - (43%)
• Gaps: 37/157 - (23%)

plant     3 STTSIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTT------WNLQRT 61
            |.||:       ||.|:|..|.::::  |.:::|. :...|.:....:|...|      |.|.|.
Mouse   204 SRTSV-------VFVSISFIVLMIIS--LAWLVFY-YIQRFRYANARDRNQYTIATGQDWQLYRR 258

plant    62 PYGDLIHVATPPENTGLDPFIIRSFPVFHYSSATKKNHGTE-----CAICLSEFSDEDTVRLITV 121
            ..||....|       :....:|:.        .|.:..||     ||:|:..:...|.||::.
Mouse   259 RLGDAAKKA-------ISKLQVRTI--------RKGDKETESDFDNCAVCIEGYKPNDVVRILP- 307

plant   122 CRHPFHSNCIDLWFELHKTCPVCRCEL 148
            |||.||.:|:|.|...|:|||:|:..:
Mouse   308 CRHLFHKSCVDPWLLDHRTCPMCKMNI 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT2G35420	NP_181085.2	RING-H2_PA-TM-RING	102..145	CDD:438118	19/47 (40%)
		rad18	103..>193	CDD:273165	19/46 (41%)
Rnf150	XP_017168354.1	PA_GRAIL_like	45..192	CDD:239037
		RING-H2_RNF150	282..336	CDD:438456	21/54 (39%)