DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment AT2G35420 and meu34

DIOPT Version :9

Sequence 1:	NP_181085.2	Gene:	AT2G35420 / 818108	AraportID:	AT2G35420	Length:	254	Species:	Arabidopsis thaliana
Sequence 2:	NP_593329.1	Gene:	meu34 / 2543036	PomBaseID:	SPAC3A12.03c	Length:	309	Species:	Schizosaccharomyces pombe

Alignment Length:	188	Identity:	39/188 - (20%)
Similarity:	66/188 - (35%)	Gaps:	63/188 - (33%)

- Green bases have known domain annotations that are detailed below.

plant    74 ENTGLDPFIIRSFPV----------FHYSSATKKNHGTE-------------------CAICLSE 109
            :..|..|.:|.::.|          ...|||....:.|:                   |.||.::
pombe   147 QGQGETPSVIITYDVRRPNLGSTSFVEMSSALSNIYNTDASDGDSSDDSCLLEDEEDFCIICYAD 211

plant   110 FSDEDTVRLITVCRHPFHSNCIDLWFELHK-TCPVCRCELDPGMIGSGRLESFHNTVTITIQDIN 173
            ::.:|.:|::. |.|.||:.|||.|....| :||:|.             |.::...      :.
pombe   212 YAFDDILRVLP-CEHVFHTQCIDTWMTTMKASCPLCN-------------EDYYKYF------LQ 256

plant   174 HDEENPPTAGSSKRLIEASAWRF------SRSHSTGHFMVKTTDANVKSKRRHYQTGS 225
            .|..:..|.       |.:||..      ||:||........:..:|::.|..|...|
pombe   257 MDAASSVTH-------ENAAWSIPLSPGDSRTHSAETDRSLLSAMSVRNSRMPYIVSS 307

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
AT2G35420	NP_181085.2	zf-RING_2	102..145	CDD:290367	16/62 (26%)
meu34	NP_593329.1	RING	205..249	CDD:238093	17/57 (30%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	80	1.000	Inparanoid score	I1960
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050