DRSC/TRiP Functional Genomics Resources

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Protein Alignment SF3A2 and Sf3a2

DIOPT Version :9

Sequence 1:NP_009096.2 Gene:SF3A2 / 8175 HGNCID:10766 Length:464 Species:Homo sapiens
Sequence 2:NP_648603.1 Gene:Sf3a2 / 39456 FlyBaseID:FBgn0036314 Length:264 Species:Drosophila melanogaster


Alignment Length:307 Identity:208/307 - (67%)
Similarity:228/307 - (74%) Gaps:49/307 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDFQHRPGGKTGSGGVASSSESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCLTLHNN 65
            ||||:|.|||||||||||.||:||||:||||||||||||:|||||||||||||||||||||||||
  Fly     1 MDFQNRAGGKTGSGGVASWSETNRDRKERLRQLALETIDLNKDPYFMKNHLGSYECKLCLTLHNN 65

Human    66 EGSYLAHTQGKKHQTNLARRAAKEAKEAPAQ-PAPEKVKVEVKKFVKIGRPGYKVTKQRDSEMGQ 129
            ||||||||||||||.||||||||||||||:. .||||.:||.|||||||||||:|||||:...||
  Fly    66 EGSYLAHTQGKKHQDNLARRAAKEAKEAPSSLLAPEKPRVEPKKFVKIGRPGYRVTKQRELSNGQ 130

Human   130 QSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIAFKVPSREIDKAEGK 194
            ||||||:|||||.|.|:|||||||||||:||||||:|||||.||||||||.|||||||::|:|||
  Fly   131 QSLLFQVDYPEITESIVPRHRFMSAYEQKIEPPDRKWQYLLFAAEPYETIGFKVPSREVEKSEGK 195

Human   195 FWTHWNRETKQFFLQFHFKMEKPPAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL 259
            |||||||:||||||||.||.|....||           |||.|...|            .||||.
  Fly   196 FWTHWNRDTKQFFLQFAFKFEPKILPP-----------PPPNLHRAL------------GPPGGF 237

Human   260 PLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAP 306
            |:             ||||:            |.:||..:|||||.|
  Fly   238 PM-------------PGPPR------------PAMHPMFNGVHPPPP 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SF3A2NP_009096.2 PRP11 1..217 CDD:227571 183/216 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 21/25 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..464 25/90 (28%)
PRK07764 <302..>427 CDD:236090 4/5 (80%)
Sf3a2NP_648603.1 PRP11 1..214 CDD:227571 180/212 (85%)
ZnF_U1 52..85 CDD:197732 31/32 (97%)
SF3A2 129..207 CDD:293440 65/77 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165145835
Domainoid 1 1.000 178 1.000 Domainoid score I3578
eggNOG 1 0.900 - - E1_COG5246
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 408 1.000 Inparanoid score I1886
Isobase 1 0.950 - 0 Normalized mean entropy S781
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1320891at2759
OrthoFinder 1 1.000 - - FOG0004594
OrthoInspector 1 1.000 - - oto91316
orthoMCL 1 0.900 - - OOG6_102158
Panther 1 1.100 - - LDO PTHR23205
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1286
SonicParanoid 1 1.000 - - X3809
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.740

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