| Sequence 1: | XP_011508323.1 | Gene: | NECTIN4 / 81607 | HGNCID: | 19688 | Length: | 511 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017454387.1 | Gene: | Nectin4 / 498281 | RGDID: | 1559826 | Length: | 509 | Species: | Rattus norvegicus |
| Alignment Length: | 511 | Identity: | 479/511 - (93%) |
|---|---|---|---|
| Similarity: | 489/511 - (95%) | Gaps: | 2/511 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MPLSLGAEMWGPEAWLLLLLLLASFTGRCPAGELETSDVVTVVLGQDAKLPCFYRGDSGEQVGQV 65
Human 66 AWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGEYECRVS 130
Human 131 TFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRS 195
Human 196 FKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILHVSFLAEASVRGLEDQNLWH 260
Human 261 IGREGAMLKCLSEGQPPPSYNWTRLDGPLPSGVRVDGDTLGFPPLTTEHSGIYVCHVSNEFSSRD 325
Human 326 SQVTVDVLADPQEDSGKQVDLVSASVVVVGVIAALLFCLLVVVVVLMSRYHRRKAQQMTQKYEEE 390
Human 391 LTLTRENSIRRLHSHHTDPRSQPEESVGLRAEGHPDSLKDNSSCSVMSEEPEGRSYSTLTTVREI 455
Human 456 ETQTELLSPGSGRAEEEEDQDEGIKQAMNHFVQENGTLRAKPTGNGIYINGRGHLV 511 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| NECTIN4 | XP_011508323.1 | IG_like | 37..145 | CDD:214653 | 96/107 (90%) |
| Ig1_Nectin-4_like | 46..146 | CDD:143296 | 89/99 (90%) | ||
| Ig2_Nectin-3-4_like | 149..242 | CDD:143328 | 89/92 (97%) | ||
| IG_like | 259..332 | CDD:214653 | 65/72 (90%) | ||
| IGc2 | 268..320 | CDD:197706 | 48/51 (94%) | ||
| Nectin4 | XP_017454387.1 | IgV_1_Nectin-4_like | 37..145 | CDD:409471 | 96/107 (90%) |
| Ig strand B | 47..51 | CDD:409471 | 3/3 (100%) | ||
| Ig strand C | 63..67 | CDD:409471 | 3/3 (100%) | ||
| Ig strand E | 109..113 | CDD:409471 | 2/3 (67%) | ||
| Ig strand F | 123..128 | CDD:409471 | 4/4 (100%) | ||
| Ig strand G | 137..140 | CDD:409471 | 2/2 (100%) | ||
| IgC1_2_Nectin-3-4_like | 148..241 | CDD:409501 | 89/92 (97%) | ||
| Ig strand B | 166..170 | CDD:409501 | 3/3 (100%) | ||
| Ig strand C | 179..183 | CDD:409501 | 3/3 (100%) | ||
| Ig strand E | 205..209 | CDD:409501 | 3/3 (100%) | ||
| Ig strand F | 219..224 | CDD:409501 | 4/4 (100%) | ||
| Ig strand G | 234..237 | CDD:409501 | 2/2 (100%) | ||
| Ig | 265..328 | CDD:409353 | 56/62 (90%) | ||
| Ig strand B | 265..269 | CDD:409353 | 2/3 (67%) | ||
| Ig strand C | 278..282 | CDD:409353 | 2/3 (67%) | ||
| Ig strand E | 298..301 | CDD:409353 | 2/2 (100%) | ||
| Ig strand F | 311..316 | CDD:409353 | 3/4 (75%) | ||
| Ig strand G | 325..328 | CDD:409353 | 2/2 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83693626 | |
| Domainoid | 1 | 1.000 | 359 | 1.000 | Domainoid score | I12421 |
| eggNOG | 1 | 0.900 | - | - | E1_2CRXB | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H32744 | |
| Inparanoid | 1 | 1.050 | 957 | 1.000 | Inparanoid score | I5818 |
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG43754 | |
| OrthoDB | 1 | 1.010 | - | - | D100891at9347 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003314 | |
| OrthoInspector | 1 | 1.000 | - | - | oto133079 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_117588 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23277 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X5723 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.270 | |||||