DRSC/TRiP Functional Genomics Resources

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Protein Alignment NDEL1 and nudE

DIOPT Version :10

Sequence 1:XP_016880672.1 Gene:NDEL1 / 81565 HGNCID:17620 Length:390 Species:Homo sapiens
Sequence 2:NP_001097569.1 Gene:nudE / 39169 FlyBaseID:FBgn0036059 Length:377 Species:Drosophila melanogaster


Alignment Length:304 Identity:111/304 - (36%)
Similarity:159/304 - (52%) Gaps:37/304 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    17 EDIPDFSSLKEETAYWKELSLKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQAD 81
            |..|.|:|:::|..||||.|.:|.:.:.:.:.|..||.|.|||:|.|::|.|.|.:...:||.|.
  Fly     2 ESPPMFNSVEDECRYWKERSKQYHKEWTDVKQEYDEFVEQSREMEIEMDATLDQKQSIIKDLTAK 66

Human    82 NQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATI 146
            ....:.|.|:||.|||....    .:|.:|..|...:..::.:..|:|:|||.|||||||.|...
  Fly    67 LTMFERENESLKLKLESHGI----DMSNMEKQLETVKKDRDTMKVYLRQLEQKNDDLERAHRILN 127

Human   147 VSLEDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVRERQQEVTRKSAPSS 211
            .|:|:||:.|:||.|:||.||.|:|||..|...:|||.||.|||:|||.|:.|...|.  :..|.
  Fly   128 ESIENFEKMLDQAYEKNALLELEVDEKGLLQEKLQRLMDETRDLKQELNVKSRFTPVV--NGTSV 190

Human   212 PTL-DCEKMDSAVQASLSLPATPVGKG----------TENTFPSPKAI----------------- 248
            ||. |...::|::.:|.|||...|..|          |..|..|..|:                 
  Fly   191 PTANDTNTVNSSMNSSASLPNGIVANGELVKHDNAVATRATSVSVNALNGSLVNRNEYNQQHSLK 255

Human   249 --PNGFGTSPLTPSARISALNIVGDLLRKVGALESKLA-ACRNF 289
              .|....:.:.||:|.:|||||.|:|||:...::.|. .|..|
  Fly   256 NPENQINGNSMNPSSRTTALNIVADMLRKLNWDKALLCPECEKF 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NDEL1XP_016880672.1 Smc <40..>208 CDD:440809 69/167 (41%)
NUDE_C 148..322 CDD:461464 62/173 (36%)
nudENP_001097569.1 GAS <73..>167 CDD:464001 43/97 (44%)
NUDE_C 129..>208 CDD:461464 37/80 (46%)

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