DRSC/TRiP Functional Genomics Resources

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Protein Alignment YIPF5 and Yip1d1

DIOPT Version :9

Sequence 1:NP_001020118.1 Gene:YIPF5 / 81555 HGNCID:24877 Length:257 Species:Homo sapiens
Sequence 2:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster


Alignment Length:276 Identity:129/276 - (46%)
Similarity:175/276 - (63%) Gaps:31/276 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGFENLNTDFYQTSYSIDDQSQQSYDYGGSGGPYSKQYAGYDYSQQGRFVPPD----MMQPQQP 61
            ||.|...| |||.::.|.|    .||::..........:..:|.:|..  |||:    ..||...
  Fly     1 MSQFGGPN-DFYGSAPSAD----ASYNFDMPEFGQELNFQTFDNTQAS--VPPNYDASYAQPPSQ 58

Human    62 YTGQIYQPTQAYTPASPQPFY--------------GNNFEDEPPLLEELGINFDHIWQKTLTVLH 112
            ..|..|.|| |||..|    |              ||.|:||||||||||||.:||:||||.||:
  Fly    59 GLGGFYDPT-AYTDTS----YGQDKSGKSAAGGGAGNEFDDEPPLLEELGINPNHIFQKTLAVLN 118

Human   113 PLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLGMFCLLNLM-SMTGVS 176
            ||:..|..|:.:||:|||:||||..|..|||:||:.|.|:|||..:||:..:|||:|| |.:.|:
  Fly   119 PLRGTDQQILQDTDMAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVSRSQVT 183

Human   177 FGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVA 241
            ||.||||||||||||::||...::.::||.:|:|::...|.||:.||||:|.:|.:|:.||||:|
  Fly   184 FGAVASVLGYCLLPMVVLSGINILITIQGTLGLIVSGISIFWCAISASKLFATAFSMDHQQLLIA 248

Human   242 YPCALLYGVFALISVF 257
            ||||:|||.||||:::
  Fly   249 YPCAVLYGGFALITIY 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
YIPF5NP_001020118.1 Interaction with Sec23 75..106 19/44 (43%)
Yip1 <89..257 CDD:419731 98/168 (58%)
Yip1d1NP_609596.1 Yip1 <95..264 CDD:304430 98/168 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147994
Domainoid 1 1.000 156 1.000 Domainoid score I4189
eggNOG 1 0.900 - - E1_COG5080
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56969
Inparanoid 1 1.050 227 1.000 Inparanoid score I3487
Isobase 1 0.950 - 0 Normalized mean entropy S991
OMA 1 1.010 - - QHG54466
OrthoDB 1 1.010 - - D1457080at2759
OrthoFinder 1 1.000 - - FOG0001876
OrthoInspector 1 1.000 - - otm41388
orthoMCL 1 0.900 - - OOG6_101570
Panther 1 1.100 - - O PTHR21236
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1888
SonicParanoid 1 1.000 - - X1236
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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