DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMX1 and CaBP1

DIOPT Version :10

Sequence 1:NP_110382.3 Gene:TMX1 / 81542 HGNCID:15487 Length:280 Species:Homo sapiens
Sequence 2:NP_609792.1 Gene:CaBP1 / 34976 FlyBaseID:FBgn0025678 Length:433 Species:Drosophila melanogaster


Alignment Length:107 Identity:36/107 - (33%)
Similarity:57/107 - (53%) Gaps:13/107 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    34 ITDENWREL-LEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDL--EVNIAKVDVTEQPGLSG 93
            :|::|:.:| |..|  |::||:||||..|:||.|||   |:..::|  :|.:..:|.|.....:.
  Fly   161 LTEDNFDKLVLNSDDIWLVEFFAPWCGHCKNLAPEW---AKAAKELKGKVKLGALDATAHQSKAA 222

Human    94 RFIITALPTIYHCKDGEFR-----RYQGPRTKKDFINFISDK 130
            .:.:...|||.....|..|     .|.|.||..|.:::.|||
  Fly   223 EYNVRGYPTIKFFPAGSKRASDAQEYDGGRTASDIVSWASDK 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMX1NP_110382.3 PDI_a_TMX 29..129 CDD:239292 33/104 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..280
CaBP1NP_609792.1 PDI_a_P5 26..119 CDD:239299
PDI_a_P5 157..262 CDD:239299 33/103 (32%)
P5_C 271..400 CDD:239281
Blue background indicates that the domain is not in the aligned region.

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