DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT2G07727 and CYTB

DIOPT Version :9

Sequence 1:NP_178804.1 Gene:AT2G07727 / 815400 AraportID:AT2G07727 Length:393 Species:Arabidopsis thaliana
Sequence 2:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster


Alignment Length:374 Identity:204/374 - (54%)
Similarity:265/374 - (70%) Gaps:10/374 - (2%)


- Green bases have known domain annotations that are detailed below.


plant     3 IRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLA 67
            :||      ..|:....|..|||.|.|.|:|.||.||.|.|:||:|||:||:|||||||..::||
  Fly     5 LRN------SHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLA 63

plant    68 FNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYS-SPREFVWCLGVVIFLLMI 131
            |.||.||.|||..|||||.:||||||.|.|.:|||:.||:|:.||. :|   .|.:||:|..|::
  Fly    64 FYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVM 125

plant   132 VTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHHLLPFIL 196
            .|||:||||||||||||||||||:|.||||.:|..:|.||||||:||||||.|||:.|.:||||:
  Fly   126 GTAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIV 190

plant   197 VGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPD 261
            :..:::||..|||.|||||:|::|.:|||.|:|||..||:||::.........:..:||:||.||
  Fly   191 LAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLGDPD 255

plant   262 NYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSFRP 326
            |:|||||:.||.||.||||||..:|||||||:|.|||.|:......|:.|||:.....|...|.|
  Fly   256 NFIPANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFYNLSKFRGIQFYP 320

plant   327 IHQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQISPLVFFLFFAITPIL 375
            |:|.|||.:|...:||.|||.:|||.|:|.||||..:|:||::.:.|::
  Fly   321 INQVMFWSMLVTVILLTWIGARPVEEPYVLIGQILTVVYFLYYLVNPLI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT2G07727NP_178804.1 CYTB 19..373 CDD:214440 200/354 (56%)
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 200/357 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 259 1.000 Domainoid score I488
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 445 1.000 Inparanoid score I400
OMA 1 1.010 - - QHG60605
OrthoDB 1 1.010 - - D1125966at2759
OrthoFinder 1 1.000 - - FOG0004155
OrthoInspector 1 1.000 - - oto3241
orthoMCL 1 0.900 - - OOG6_102198
Panther 1 1.100 - - LDO PTHR19271
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1779
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.980

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