DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT2G07727 and CYTB

DIOPT Version :10

Sequence 1:NP_178804.1 Gene:AT2G07727 / 815400 AraportID:AT2G07727 Length:393 Species:Arabidopsis thaliana
Sequence 2:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster


Alignment Length:374 Identity:204/374 - (54%)
Similarity:265/374 - (70%) Gaps:10/374 - (2%)


- Green bases have known domain annotations that are detailed below.


plant     3 IRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLA 67
            :||      ..|:....|..|||.|.|.|:|.||.||.|.|:||:|||:||:|||||||..::||
  Fly     5 LRN------SHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLA 63

plant    68 FNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYS-SPREFVWCLGVVIFLLMI 131
            |.||.||.|||..|||||.:||||||.|.|.:|||:.||:|:.||. :|   .|.:||:|..|::
  Fly    64 FYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVM 125

plant   132 VTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHHLLPFIL 196
            .|||:||||||||||||||||||:|.||||.:|..:|.||||||:||||||.|||:.|.:||||:
  Fly   126 GTAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIV 190

plant   197 VGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPD 261
            :..:::||..|||.|||||:|::|.:|||.|:|||..||:||::.........:..:||:||.||
  Fly   191 LAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLGDPD 255

plant   262 NYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSFRP 326
            |:|||||:.||.||.||||||..:|||||||:|.|||.|:......|:.|||:.....|...|.|
  Fly   256 NFIPANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFYNLSKFRGIQFYP 320

plant   327 IHQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQISPLVFFLFFAITPIL 375
            |:|.|||.:|...:||.|||.:|||.|:|.||||..:|:||::.:.|::
  Fly   321 INQVMFWSMLVTVILLTWIGARPVEEPYVLIGQILTVVYFLYYLVNPLI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT2G07727NP_178804.1 CYTB 19..373 CDD:214440 200/354 (56%)
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 200/357 (56%)

Return to query results.
Submit another query.