DRSC/TRiP Functional Genomics Resources

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Protein Alignment RND2 and Rac1

DIOPT Version :9

Sequence 1:XP_011523618.1 Gene:RND2 / 8153 HGNCID:18315 Length:234 Species:Homo sapiens
Sequence 2:NP_001261247.1 Gene:Rac1 / 38146 FlyBaseID:FBgn0010333 Length:192 Species:Drosophila melanogaster


Alignment Length:169 Identity:75/169 - (44%)
Similarity:114/169 - (67%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     9 KIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRP 73
            |.|||||...|||.||..:..:|:||.|:||||:||:|:..:|.:.|.|.:|||:|...||.:||
  Fly     5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRP 69

Human    74 LAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRL 138
            |:||.:|..||||.:..|.:.::|..||..|.:..||:..::|||.|||:|.|..|:.:|..::|
  Fly    70 LSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLDLRDDKNTIEKLRDKKL 134

Human   139 IPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVA 177
            .|:|:.||..:||::|||.|:|||: .:::.::.||..|
  Fly   135 APITYPQGLAMAKEIGAVKYLECSA-LTQKGLKTVFDEA 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RND2XP_011523618.1 Rnd2_Rho7 7..227 CDD:206736 75/169 (44%)
RHO 10..182 CDD:197554 74/168 (44%)
Rac1NP_001261247.1 Rac1_like 3..176 CDD:206663 75/169 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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