DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP3B2 and rb

DIOPT Version :10

Sequence 1:NP_001265441.1 Gene:AP3B2 / 8120 HGNCID:567 Length:1101 Species:Homo sapiens
Sequence 2:NP_525071.2 Gene:rb / 31381 FlyBaseID:FBgn0003210 Length:1160 Species:Drosophila melanogaster


Alignment Length:1181 Identity:602/1181 - (50%)
Similarity:761/1181 - (64%) Gaps:154/1181 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    21 EYGHDPASG-GIFSSDYKRHDDLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVAC 84
            |:|.||||| ..|.||.::|||||:|||:|||.|||||||||:.|||||::||||||||||||..
  Fly    26 EFGADPASGAAFFQSDGRKHDDLKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVVS 90

Human    85 KNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLA 149
            |||||||||||||||||||||||||||||||||.|||||||||||||||||||||.:||||:|||
  Fly    91 KNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLA 155

Human   150 IKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERI 214
            |:::|:|:|||||||||||||||||||:||||:|:.||||||:|:||||.||.||||:||||||:
  Fly   156 IRDSAADLSPYVRKTAAHAIPKLYSLDADQKDELVMVIEKLLSDRTTLVVGSAVMAFDEVCPERV 220

Human   215 DLIHKNYRKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQ------NESLLEENAEKAFY--- 270
            ||||||||||||.|:||:|||||:||:||||||||||:.|..      |:.|.|....:.||   
  Fly   221 DLIHKNYRKLCNFLLDVDEWGQVIIINMLTRYARTQFVDPNADDEDLVNDGLGETPVSERFYDES 285

Human   271 ---------GSEEDE--------AKGAGSEETAAAAAPSRKPYVMDPDHRLLLRNTKPLLQSRSA 318
                     ||.:||        ....|...:...::||.. |.:|.|||||||.||||||||:|
  Fly   286 SHSSSHSDDGSSDDEKNKSSTNNKNNGGGNGSRTPSSPSNS-YHIDVDHRLLLRQTKPLLQSRNA 349

Human   319 AVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIR 383
            :|||||||||.|:|||.||.:|||||:||||||.|||.|||..:|:||.||:.:|||:||||::|
  Fly   350 SVVMAVAQLYHHVAPKNEVQLIAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVR 414

Human   384 STDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCL 448
            ::|||.||:|||::|||||:..:|..:||||||||.|.|:.|||||||||||||::|..|.:|||
  Fly   415 TSDPTHIKLLKLDILTNLASAGSISLILREFQTYISSSDRSFVAATIQAIGRCASSIKEVTETCL 479

Human   449 NGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCE 513
            :|||.||||.||.||||||||||:|||.:.|:|.|||..:|||.|.|.||.|||:|:||||||.|
  Fly   480 SGLVHLLSNHDEHVVAESVVVIKRLLQTKAAEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNE 544

Human   514 HVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLTQYVLSLAKYDQNYDIRDR 578
            .||.|||||||||||||..|:|:|||||:||..||||||.:||.||.|||.:||:||.|||:|||
  Fly   545 KVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNPEQTSLLCQYVFTLARYDPNYDVRDR 609

Human   579 ARFTRQLIVP-SEQGGALSRHAKKLFLAPKPAPVLESSFKDRDHFQLGSLSHLLNAKATGYQELP 642
            |||.||:|.| |.....||:||:::|||.|||||.||.::|.::||||||||.||..|.||:|||
  Fly   610 ARFLRQIIFPASGTSSVLSQHARQVFLASKPAPVPESKYRDGNNFQLGSLSHYLNMPAAGYKELP 674

Human   643 DWPEEAPDPSVRNVEEEDLSLIETHVGLL-----GEYTEVPEWTKCSNREKRKEK----EKPFYS 698
            .:|...||.||||:           .|.:     ||.:........|.||..|||    ||.|.|
  Fly   675 AFPVIPPDSSVRNI-----------AGFMQDKLPGEDSPSGHSKDKSGREGGKEKGAGGEKGFLS 728

Human   699 DSEGESGPTESADSDPESESESDSKSSSESGSGESSSESDNEDQDEDEEKGRGSESEQSEEDGKR 763
            :|              :.:|.:.|:|.|.||||.|.||||::        |.||..|:.||..|:
  Fly   729 ES--------------DDKSSAYSESGSSSGSGTSDSESDSD--------GSGSSDEEEEEVQKQ 771

Human   764 KTKK--KVPER-----------------------------KGEASSSDEGSDSSSSSSESEMTSE 797
            :..|  .|.||                             .|.:.|.|..:.|.|||.:|...|:
  Fly   772 QPTKVSSVKERLIDAGSNELAATSSPVKATINNNNNARGSSGTSDSEDSSAYSGSSSDDSASGSD 836

Human   798 SEEEQLEPASWSRKTP----------PSSKSAPATKEISLLDLEDFTPPSVQPVSPPAIVSTSLA 852
            :|.::.|..:.:...|          |...:..:..:: ||||:|.  |.:.||..|::      
  Fly   837 NEVKKNETKTDTGTKPEKLKEKHEKQPEQTAVKSNLDL-LLDLDDI--PPIGPVMTPSL------ 892

Human   853 ADLEGLTLTDSTLVPSL------LSP------VSGVG-------RQELLHRVAGEGLAVDYTFSR 898
                |..||..|  |.:      |.|      |..||       .:|||::|:|.||.:.|.|:|
  Fly   893 ----GGFLTPGT--PMMAGQAAPLQPQHARNRVELVGPSHIEFKHKELLNKVSGHGLHLAYRFTR 951

Human   899 QPFSGDPHMVSVHIHFSNSSDTPIKGLHVGTPKLPAGISIQEFPEIESLAPGESATAVMGINFCD 963
            .|......|.|:.:.|.|..:..|..:.:|...||||:.:.||..|..|.|.::|:.|:|::|.|
  Fly   952 SPHLYSSSMCSIELQFQNRGEKEITAIRLGQTTLPAGMQLNEFAPITVLQPQQTASGVLGVDFND 1016

Human   964 STQAANFQLCTQTRQFYVSIQPPVGELMAPVFMSENEFKKEQGKLMGMNEITEKLMLPDTCRSDH 1028
            ||.|.:.:|.:......:.::||||||:..|.:.|:..::|:.||.||||...:|.   ..|.|.
  Fly  1017 STHAVDLELLSSAGSSRLQLKPPVGELVRSVQIGESCHREERAKLRGMNEHQCELR---GLRQDL 1078

Human  1029 IVV----QKVTATANLGRVPCGTSDE-YRFAGRTLTGGSLVLLTLDARPAGAAQLTVNSEKMVIG 1088
            |.|    |||..:.|:......:|.: :.|||:||:..||||||||.:...|..|.||.||||||
  Fly  1079 IDVVALRQKVFESINVAHTHSSSSGQLHCFAGQTLSSKSLVLLTLDWKTEDALTLLVNCEKMVIG 1143

Human  1089 TMLVKDVIQAL 1099
            :|::.::..||
  Fly  1144 SMVLNELRNAL 1154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP3B2NP_001265441.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 7/9 (78%)
Adaptin_N 34..590 CDD:396262 399/582 (69%)
HEAT repeat 111..139 CDD:293787 26/27 (96%)
HEAT repeat 145..173 CDD:293787 21/27 (78%)
HEAT repeat 182..208 CDD:293787 18/25 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..295 6/30 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..821 47/180 (26%)
AP3B1_C 822..966 CDD:464319 51/162 (31%)
rbNP_525071.2 Adaptin_N 40..621 CDD:396262 399/581 (69%)
HEAT repeat 48..73 CDD:293787 19/24 (79%)
HEAT repeat 117..144 CDD:293787 25/26 (96%)
HEAT repeat 147..179 CDD:293787 24/31 (77%)
HEAT repeat 188..214 CDD:293787 18/25 (72%)
AP3B1_C 881..1019 CDD:464319 46/151 (30%)

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