DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTN4 and ain1

DIOPT Version :10

Sequence 1:NP_001427225.1 Gene:ACTN4 / 81 HGNCID:166 Length:933 Species:Homo sapiens
Sequence 2:NP_594295.1 Gene:ain1 / 2542805 PomBaseID:SPAC15A10.08 Length:621 Species:Schizosaccharomyces pombe


Alignment Length:889 Identity:226/889 - (25%)
Similarity:351/889 - (39%) Gaps:284/889 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    48 WEKQQRKTFTAWCNSHLRKAG-TQIENIDEDFRDGLKLMLLLEVISGERLPKPERG-KMRVHKIN 110
            |:..|.:|||.|.|:.|.... ..:.::.:|..||:.|:.|||:|..|.|.:..|. :||||::.
pombe     6 WQSVQNRTFTKWFNTKLSSRDLPSVFDLRKDLSDGILLIQLLEIIGDENLGRYNRNPRMRVHRLE 70

Human   111 NVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQR 175
            ||||||::|.|||:.|.:||..:|||||.|:.||:|||:||||.|.||:.|..:|||||||||||
pombe    71 NVNKALEYIKSKGMPLTNIGPADIVDGNLKLILGLIWTLILRFTIADINEEGLTAKEGLLLWCQR 135

Human   176 KTAPY-KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPK 239
            |||.| ..|:||:|..||.:||||.||||:|||:|::|:||.|.:...|:..||::|:|.:.||:
pombe   136 KTANYHPEVDVQDFTRSWTNGLAFCALIHQHRPDLLDYNKLDKKNHRANMQLAFDIAQKSIGIPR 200

Human   240 MLDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASD 304
            :::.||:.:..||||::|||||:.::||||...|.||||.|:.:...|......:..|||.....
pombe   201 LIEVEDVCDVDRPDERSIMTYVAEYFHAFSTLDKVETAARRVERFTEVLMSTHDMKIDYESRMKR 265

Human   305 LLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNR 369
            ||..|.|...:......:....:::....:|..::...|...|:||..||....|:||.|:....
pombe   266 LLGSIARMQEYWHTVQFENNYTDVKSHSNNFAKFKATEKREWVKEKIDLESLLGTIQTNLKTYQL 330

Human   370 PAFMPSEGKMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEA 434
            ..:.|..|..:.|:...|:                       |.|:|                  
pombe   331 RKYEPPAGLKIVDLERQWK-----------------------DFLSE------------------ 354

Human   435 MLKHRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSHNVNTRCQKIC 499
                                  ||.:|.|                           :||..::| 
pombe   355 ----------------------EANQSKL---------------------------INTHMREI- 369

Human   500 DQWDALGSLTHSRREALEKTEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIE 564
                                                                             
pombe   370 ----------------------------------------------------------------- 369

Human   565 GLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQL 629
                                       ||:.|||                               
pombe   370 ---------------------------KESMRIA------------------------------- 376

Human   630 VPKRDHALLEEQSKQQSNEHLRRQFASQANVVGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYE 694
                                    ||.:||.....:.|...||    ..:.|...|||.|::..:
pombe   377 ------------------------FADRANSFSKMLSTISNEI----TNLQGDWRDQLDHVEFLQ 413

Human   695 RSIVDYKPNLDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDA 759
            ..:...:..|..::..:....:|.|.:|.:|.::.|.:...:......||..|..:||::|.|:.
pombe   414 EHLGPLEVELASVKVLYDNCFQAGIEENDYTMFSYEDLEHEFGITANIIANKIKYLENELLEREK 478

Human   760 KGISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLG--YDVENDRQKQTGSMDSDDFRALLI 822
            :.:|::::......|.||:|.....|...||.|.|.|||  ||.|.                   
pombe   479 RTLSKQELDGITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEE------------------- 524

Human   823 STGYSLGEAEFNRIMSLVDPNHSGLVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDKNFITAE 887
                  |.|.|:|.     .|....||::.|.:.:..|..|.|:|.||:.:|..:|..|:::|::
pombe   525 ------GTALFHRA-----ANSEEGVTYERFTEIVMEELEDRDSARQVLYAFCDVADGKSYVTSD 578

Human   888 E-LRRELPPDQAEYCIARMAPYQGPDAVPGALDYKSFSTALYGE 930
            : ||.::.|:..::....|..:.      ..|||.::...|..|
pombe   579 DLLRSQVRPNIVKFLECNMNKHS------EGLDYLTWIKQLLAE 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTN4NP_001427225.1 None
ain1NP_594295.1 SAC6 1..616 CDD:227401 225/887 (25%)

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