DRSC/TRiP Functional Genomics Resources

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Protein Alignment CALM3 and Mlc1

DIOPT Version :10

Sequence 1:NP_005175.2 Gene:CALM3 / 808 HGNCID:1449 Length:149 Species:Homo sapiens
Sequence 2:NP_476639.1 Gene:Mlc1 / 43323 FlyBaseID:FBgn0002772 Length:155 Species:Drosophila melanogaster


Alignment Length:159 Identity:47/159 - (29%)
Similarity:77/159 - (48%) Gaps:25/159 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT-- 63
            ||| :.:.::...:..|.:....|:| |...:||..:|:|..|||.|.::.:        .||  
  Fly     1 MAD-VPKREVENVEFVFEVMGSPGEG-IDAVDLGDALRALNLNPTLALIEKL--------GGTKK 55

Human    64 -----IDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEE 121
                 |...|||.:  ..:|.|:....|:..|..:::||:.||.:..|||:|.:..|||.|.||:
  Fly    56 RNEKKIKLDEFLPIYSQVKKEKEQGCYEDFIECLKLYDKEENGTMLLAELQHALLALGESLDDEQ 120

Human   122 VDEMIREADI----DGDGQVNYEEFVQMM 146
            |:.:.  ||.    |.:|.:.|..|:..|
  Fly   121 VETLF--ADCMDPEDDEGFIPYSPFLARM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CALM3NP_005175.2 PTZ00184 1..149 CDD:185504 47/159 (30%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000269|PubMed:27876793 77..149 25/74 (34%)
Mlc1NP_476639.1 PTZ00184 1..150 CDD:185504 47/159 (30%)

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