DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CALM3 and CG17237

DIOPT Version :10

Sequence 1:NP_005175.2 Gene:CALM3 / 808 HGNCID:1449 Length:149 Species:Homo sapiens
Sequence 2:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster


Alignment Length:148 Identity:46/148 - (31%)
Similarity:78/148 - (52%) Gaps:12/148 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL- 70
            :.:|.|....|...|..||..|:.:.||..:|::|..||||.:...:.:.:|.....|.|.|.: 
  Fly    42 KSRIMEMHAIFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRICFDEVMG 106

Human    71 ---------TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 126
                     .|::.|.|..::::.: .:.||||.|.:|:|.|..||.::|..||.:...||||::
  Fly   107 IYSSLGKHGGMLSPKKKQIEADQFV-SSLRVFDTDKSGWIPAIRLRRILTKTGECMGSMEVDELL 170

Human   127 READIDGDGQVNYEEFVQ 144
             :..|:.||.|:|::.||
  Fly   171 -QGRINKDGLVDYKKLVQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CALM3NP_005175.2 PTZ00184 1..149 CDD:185504 46/148 (31%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000269|PubMed:27876793 77..149 25/68 (37%)
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 44/143 (31%)

Return to query results.
Submit another query.