DRSC/TRiP Functional Genomics Resources

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Protein Alignment PBX4 and achi

DIOPT Version :10

Sequence 1:XP_011526622.1 Gene:PBX4 / 80714 HGNCID:13403 Length:391 Species:Homo sapiens
Sequence 2:NP_725183.1 Gene:achi / 36373 FlyBaseID:FBgn0033749 Length:555 Species:Drosophila melanogaster


Alignment Length:242 Identity:55/242 - (22%)
Similarity:86/242 - (35%) Gaps:69/242 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   172 HV-TNLLQEQSRMRPVSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDA-------- 227
            || .:||:.:.|.|..|...:::  .::|......:.|..:.....|......::|:        
  Fly    29 HVQASLLENEGRGRFHSDSSLDQ--DSLHADVIVEEDQSTEHGANQVQNYHDMMVDSEHHIDING 91

Human   228 --RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMG 290
              |::|.|..|.:.::|..:.|.|..|.|||:..|..|:::..||:.||.|||.|.|.|....| 
  Fly    92 SLRKRRGNLPKTSVKILKRWLYEHRYNAYPSDAEKFTLSQEANLTVLQVCNWFINARRRILPEM- 155

Human   291 KFQEEATIYTGKTAVDTTEVGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGG 355
                               :...||.               ||     .|...|....:.|    
  Fly   156 -------------------IRREGND---------------PL-----HFTISRRGKKVSP---- 177

Human   356 GCLQSQAQGSWQGATPQPATASPAGD-----------PGSINSSTSN 391
            .|.:|.|.|: ....|.||..|||.:           .|.|:...:|
  Fly   178 NCSRSSALGA-NLTGPNPAHGSPASEVVVGATEEVDGAGEIHEGIAN 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PBX4XP_011526622.1 PBC 18..226 CDD:461052 10/54 (19%)
homeodomain 228..289 CDD:238039 23/60 (38%)
achiNP_725183.1 Homeobox_KN 112..150 CDD:428673 17/37 (46%)

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