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Protein Alignment CALM2 and sqh
DIOPT Version :10
| Sequence 1: | NP_001292553.1 |
Gene: | CALM2 / 805 |
HGNCID: | 1445 |
Length: | 197 |
Species: | Homo sapiens |
| Sequence 2: | NP_511057.1 |
Gene: | sqh / 31554 |
FlyBaseID: | FBgn0003514 |
Length: | 174 |
Species: | Drosophila melanogaster |
| Alignment Length: | 51 |
Identity: | 16/51 - (31%) |
| Similarity: | 23/51 - (45%) |
Gaps: | 9/51 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Human 248 AGAARPGLLTLAKPMDAPAVNKAIKSPPGF-----SAKGLTHPSSSPLLKK 293
||...|| ..||....|||.:.|: .|| :..|:.||..:.::.|
Fly 397 AGLHTPG-CQLALVSVAPAYSGAV---TGFTFFFVAVSGIIHPIITKMIVK 443
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CALM2 | NP_001292553.1 |
PTZ00184 |
50..197 |
CDD:185504 |
|
| sqh | NP_511057.1 |
PTZ00184 |
27..164 |
CDD:185504 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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