DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSRP3 and CG33521

DIOPT Version :10

Sequence 1:NP_003467.1 Gene:CSRP3 / 8048 HGNCID:2472 Length:194 Species:Homo sapiens
Sequence 2:NP_001014703.1 Gene:CG33521 / 3346141 FlyBaseID:FBgn0250819 Length:663 Species:Drosophila melanogaster


Alignment Length:225 Identity:49/225 - (21%)
Similarity:80/225 - (35%) Gaps:62/225 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    10 CGACEKTVYHAEEIQCNGRS----FHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKG 70
            |..|:|.||..||:..:.::    |||||..|..|.|.|...:...|:..:||.:.:...:.||.
  Fly    80 CHQCKKPVYKMEEVILSLKTATTIFHKTCLRCKDCGKHLKFDSYNVHDGSLYCSMHFKLIFAPKV 144

Human    71 IGYGQGAGCLSTDTGEHLGLQFQQ-SPKPARSVTTSN-PSKFTAKFGESEKCPRCG------KSV 127
            :                    ::: :|:.|..:...| |.|......::...|..|      .::
  Fly   145 V--------------------YEEFTPRKAELIIRENQPIKLPPDVAKASDKPSLGLDELQELNL 189

Human   128 YAAEKVMGGGKPWHKTCFR----CAIC-GKSLEST-----------------------NVTDKDG 164
            .:..||...|...|....|    .||. .||::||                       |.:|.||
  Fly   190 RSKFKVFENGYEEHNNNLRERQDIAITHSKSIQSTLTKFHGLGIPNSELTKLDDKNSDNNSDGDG 254

Human   165 ELYCKVCYAKNF-GPTGIGFGGLTQQVEKK 193
            ::.. :|..|.. ..|.:|.|.....:..|
  Fly   255 DMNF-MCLKKEIERETPVGLGEAMNDIRSK 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSRP3NP_003467.1 Interaction with TCAP. /evidence=ECO:0000269|PubMed:12507422 1..5
LIM1_CRP3 9..62 CDD:188865 19/55 (35%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P50463, ECO:0000255 64..69 0/4 (0%)
Interaction with CLF2 and isoform 2. /evidence=ECO:0000269|PubMed:19752190, ECO:0000269|PubMed:24860983 94..105 2/11 (18%)
LIM2_CRP3 120..173 CDD:188866 18/86 (21%)
CG33521NP_001014703.1 LIM_Mical_like_2 80..136 CDD:188829 19/55 (35%)
Blue background indicates that the domain is not in the aligned region.

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