DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CD276 and hbs

DIOPT Version :9

Sequence 1:NP_001019907.1 Gene:CD276 / 80381 HGNCID:19137 Length:534 Species:Homo sapiens
Sequence 2:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster


Alignment Length:320 Identity:73/320 - (22%)
Similarity:130/320 - (40%) Gaps:46/320 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   132 AAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCSSYQGYPEAEV-FWQDGQGVPLTGNVTTSQM 195
            |..:|.|..|.....:::.| |:|.||....:.|.|....|.|:: :|:|  |:|:.|    ..:
  Fly   533 ATKTLGVHFPPETVKISVVP-KNLVPGIRAKLICDSSSSNPPAKISWWKD--GIPVEG----LNL 590

Human   196 ANEQGLF-----DVHSILRVVLGANG-TYSCLVRNPVLQQDAHSSVTITPQRSPTGAVEVQVPED 254
            ||..||:     .:...:.:....:| .|:|...|.|||:..|.::::.....|    :.:.|:.
  Fly   591 ANRPGLWGGSVSTLEMYVNITQDLDGIVYTCQSHNEVLQRSVHETISLDILYPP----KFETPQS 651

Human   255 PVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYANRTALFPDLLA 319
              ...||.:.   ..|..|            .|.....:|.::|..:| |...::.:.....|::
  Fly   652 --TTFVGVEG---APFHVE------------LLASGNPMVITYTWTKD-GLPISSNSLSGQRLIS 698

Human   320 QGNASLRLQRVRVADEGSFTCFVSIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCS 384
            .| ..|.:.|:...|.|.:.| .::...|:|.:.:|||..|:.....:...:....|:...:.|.
  Fly   699 DG-PRLNISRLSRNDAGVYIC-EALNSQGTALLEIQVAVEYAPTITAVSEGRSFVAGEPAVLACH 761

Human   385 -SYRGYPEAEVFW-QDGQGVPLTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYSCLVRN 442
             ..|....|.|.| :||..:   ...|.|...|...|..:.||.|..:   |.::|:|.|
  Fly   762 IQARPLEAAHVRWSRDGYDL---ATRTISSFENGTALLQIASVERSDI---GNFTCIVDN 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD276NP_001019907.1 IG_like 37..138 CDD:214653 2/5 (40%)
Ig 43..139 CDD:299845 2/6 (33%)
Ig 148..231 CDD:299845 25/89 (28%)
IG_like 156..237 CDD:214653 23/87 (26%)
IG_like 255..356 CDD:214653 18/100 (18%)
Ig 261..357 CDD:299845 18/95 (19%)
Ig 366..449 CDD:299845 19/79 (24%)
IG_like 374..456 CDD:214653 19/71 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..534
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653
Ig 360..427 CDD:299845
Ig <468..526 CDD:299845
I-set 547..633 CDD:254352 25/92 (27%)
Ig 556..631 CDD:299845 22/80 (28%)
I-set 644..735 CDD:254352 22/114 (19%)
IGc2 668..725 CDD:197706 11/59 (19%)
IG_like 751..829 CDD:214653 19/71 (27%)
IGc2 753..815 CDD:197706 18/67 (27%)
Ig 852..928 CDD:143165
FN3 935..1017 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.