DRSC/TRiP Functional Genomics Resources

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Protein Alignment PNPLA3 and pnpla3

DIOPT Version :10

Sequence 1:NP_079501.2 Gene:PNPLA3 / 80339 HGNCID:18590 Length:481 Species:Homo sapiens
Sequence 2:NP_001015693.1 Gene:pnpla3 / 548410 XenbaseID:XB-GENE-5855123 Length:498 Species:Xenopus tropicalis


Alignment Length:418 Identity:200/418 - (47%)
Similarity:270/418 - (64%) Gaps:23/418 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MYDAERGWSLSFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLFGASAGALHCVGVLSGIPLEQT 65
            |:|.||||:|||.||||||.||||.:.||.|.||.|:..|..::|||||||:...::.|..|.|.
 Frog     1 MFDLERGWNLSFCGCGFLGVYHVGVSSCLQERAPRLITQANKIYGASAGALNAAALVCGCSLAQC 65

Human    66 LQVLSDLVRKARSRNIGIFHPSFNLSKFLRQGLCKCLPANVHQLISGKIGISLTRVSDGENVLVS 130
            ...:..:.::||.||:|..||||||.|.|::||.:.||.|.|:|.|||:.|||||||||||||||
 Frog    66 CSDVLGVAKEARKRNLGPLHPSFNLVKILKKGLYRNLPENAHELASGKLCISLTRVSDGENVLVS 130

Human   131 DFRSKDEVVDALVCSCFIPFYSGLIPPSFRGVRYVDGGVSDNVPFIDAKTTITVSPFYGEYDICP 195
            :|.||:|::.||:||.|:|.|.||||||||||||||||:|:|:|..|.|.|||||||.||.||||
 Frog   131 EFNSKEELIQALICSAFVPIYCGLIPPSFRGVRYVDGGISNNLPEYDLKNTITVSPFSGESDICP 195

Human   196 K-VKSTNFLHVDITKLSLRLCTGNLYLLSRAFVPPDLKVLGEICLRGYLDAFRFLEEKGICNRPQ 259
            : ..||||..:.:|..|::...||||.|:||..||:..||||:|.:||.||.|||::..:.:.|.
 Frog   196 RDSNSTNFHELRVTNTSIQFSLGNLYRLTRALFPPEPTVLGEMCQQGYNDALRFLKDNNLLSLPS 260

Human   260 PGLKSSSEGMDPEVAMPSWANMSLDSSPESAALAVRLEGDELLDHLRLSIL----PW--DESILD 318
            |       ..|..:|.|....:|...:.:....:.|.|.|     |:..:|    ||  |:.|::
 Frog   261 P-------AADLCLAFPKATPLSHHLTCDCCVKSKREEED-----LKRKVLEGPTPWSLDKRIME 313

Human   319 TLSPRLATALSEEMKDKGGYMSKICNLLPIRIMSYVMLPCTLPVESAIAIVQRLVTWLPDMPDDV 383
            .|.|.|...|.|..::|.|...:|.:|||:|:.||:::|.||||||.:::..|||.|.||||:|:
 Frog   314 RLPPSLCYVLQEACREKNGLYHQISSLLPMRVASYMVMPYTLPVESVVSVALRLVDWFPDMPEDM 378

Human   384 LWLQ----WVTSQVFTRVLMCLLPASRS 407
            .|:|    .|...|:::....|||:.||
 Frog   379 RWMQEQVRSVAGAVYSQAKKRLLPSVRS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PNPLA3NP_079501.2 Pat_PNPLA3 8..259 CDD:132860 141/251 (56%)
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 14..19 4/4 (100%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 45..49 3/3 (100%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 166..168 1/1 (100%)
pnpla3NP_001015693.1 Pat_PNPLA2 4..253 CDD:132859 144/248 (58%)

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