DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PNPLA3 and atgl-1

DIOPT Version :10

Sequence 1:NP_079501.2 Gene:PNPLA3 / 80339 HGNCID:18590 Length:481 Species:Homo sapiens
Sequence 2:NP_741195.1 Gene:atgl-1 / 175910 WormBaseID:WBGene00015484 Length:751 Species:Caenorhabditis elegans


Alignment Length:393 Identity:140/393 - (35%)
Similarity:211/393 - (53%) Gaps:34/393 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     9 SLSFAGCGFLGFYHVGATRCLSEHAPHLLRDARMLFGASAGALHCVGVLSGIPLEQTLQVLSDLV 73
            :|||:|||||..||.|....:.|:||.||::  .:.|||||::...|:::|:.:......:..:|
 Worm    12 NLSFSGCGFLCVYHAGVAAAIKEYAPELLQN--KILGASAGSIVACGLITGVCISHATSTILKVV 74

Human    74 RKARSRNIGIFHPSFNLSKFLRQGLCKCLPANVHQLISGKIGISLTRVSDGENVLVSDFRSKDEV 138
            .:||||..|..||.|||...:|..|...||.|.:::.:|::.|||||.||.|||::.::||..::
 Worm    75 SQARSRTFGPLHPEFNLLGIVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDEYRSNADL 139

Human   139 VDALVCSCFIPFYSGLIPPSFRGVRYVDGGVSDNVPFIDAKTTITVSPFYGEYDIC-PKVKSTNF 202
            :||::||||||.|.|:.||.||||:|:|||||||.|..| :.|:|||||.||.||| |...|.:.
 Worm   140 IDAIMCSCFIPLYCGITPPKFRGVQYIDGGVSDNQPIYD-EHTVTVSPFSGESDICPPDWDSGSM 203

Human   203 LHVDITKLSLRLCTGNLYLLSRAFVPPDLKVLGEICLRGYLDAFRFLEEKGI------------- 254
            |.||....|:|..|.|::.|.....|.....|..:||:|:.||.|||.:.|:             
 Worm   204 LGVDFNGTSIRFTTRNMFRLMACLWPRSTDDLSRMCLQGFGDALRFLTKCGLAPCIRCLTIQTID 268

Human   255 CNRPQPGLKSS--SEGMDPE----VAMPSWANMSLDSSPESAALAVRLEGDELLDHLRLSILPWD 313
            .|.|...:.|.  ||..|.:    ||:|   .|...:| .:|..:.|..|:...:....|.:|.:
 Worm   269 ANEPAGRVSSECFSENDDAKKVTHVAVP---RMKKRAS-ANALNSFRTRGESECETCGDSDIPLE 329

Human   314 ESILDTLSPRLATALSEEMKDK-GGYMSKICNLLPIRIMSY---VMLPCTLPVESAIAIVQRLVT 374
            |..:.:..|.:   :.:..:|. ....|....::..|::.|   .|.....|.:.|:|.|::||.
 Worm   330 EVNIQSFFPSI---MKKPFEDAVAAERSVFQYMMSFRLVRYATTAMGISKFPFDMALAFVKKLVK 391

Human   375 WLP 377
            ..|
 Worm   392 CEP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PNPLA3NP_079501.2 Pat_PNPLA3 8..259 CDD:132860 111/263 (42%)
GXGXXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 14..19 4/4 (100%)
GXSXG. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 45..49 3/3 (100%)
DGA/G. /evidence=ECO:0000255|PROSITE-ProRule:PRU01161 166..168 1/1 (100%)
atgl-1NP_741195.1 Pat_PNPLA_like 12..252 CDD:132843 109/242 (45%)

Return to query results.
Submit another query.