DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZKSCAN3 and Zkscan3

DIOPT Version :9

Sequence 1:NP_001229823.1 Gene:ZKSCAN3 / 80317 HGNCID:13853 Length:538 Species:Homo sapiens
Sequence 2:NP_001139250.1 Gene:Zkscan3 / 72739 MGIID:1919989 Length:553 Species:Mus musculus


Alignment Length:539 Identity:388/539 - (71%)
Similarity:436/539 - (80%) Gaps:13/539 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MARELSESTALDAQSTEDQMELLVIKVEEEEAGFPSSPD---LGSEG---SRERFRGFRYPEAAG 59
            ||||..|||.||:.|.||||||||||||:|||. |.:.:   |||.|   ||:|||.||||||||
Mouse     1 MARESRESTTLDSHSAEDQMELLVIKVEQEEAS-PLAEETSWLGSPGPDRSRQRFRAFRYPEAAG 64

Human    60 PREALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNLQSWVREQHPESGEEVVVLLEYL 124
            ||:|||||||||||||:|:||||||||||||||||||||||.||:|||||||:||||||.|||||
Mouse    65 PRQALSRLRELCRQWLRPDMHSKEQILELLVLEQFLTILPGELQAWVREQHPDSGEEVVALLEYL 129

Human   125 ERQLDEPAPQVSGVDQGQELLCCKMALLTPAPGSQSSQFQLMKALLKHESVGSQPLQDRVLQVPV 189
            :||||:..|||...|.||||||.|..|||.|.||:|||.:.::.|||.||:||.|.:.||     
Mouse   130 DRQLDDTPPQVPDDDDGQELLCSKAVLLTSAQGSESSQMEPVEPLLKQESLGSLPSEVRV----- 189

Human   190 LAHGGCCREDKVVASRLTPESQGLLKVEDVALTLTPEWTQQDSSQGNLCRDEKQENHGSLVSLGD 254
             .|.|.|.||.|.|:|||.|.|||||:||||..|:|.||:|||||.||.:|..||:.||||||..
Mouse   190 -THVGHCGEDGVTATRLTSELQGLLKMEDVAPVLSPRWTEQDSSQMNLYKDGMQEHSGSLVSLDQ 253

Human   255 EKQTKSRDLPPAEELPEKEHGKISCHLREDIAQIPTCAEAGEQEGRLQRKQKNATGGRRHICHEC 319
            :.|||.||||.|||..:::..:..|.|.||...|||.|||.||||:||..||:|||.||..|.||
Mouse   254 DMQTKVRDLPRAEEYRDQKPEQTVCFLGEDTVPIPTGAEASEQEGKLQAAQKSATGTRRFYCREC 318

Human   320 GKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALVIHQRVHTGEKPYECEECGKAFSHSSD 384
            |||||||||||||:|||||.||||||||||||||||||:||||||||||||||||||||||||||
Mouse   319 GKSFAQSSGLSKHKRIHTGLKPYECEECGKAFIGSSALIIHQRVHTGEKPYECEECGKAFSHSSD 383

Human   385 LIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIHTGEKPYQCSMCGKAFRRSSHLLRHQRIHT 449
            |||||||||||||||||||||||:||||||||||||||||||||:||.||||||||||||||.||
Mouse   384 LIKHQRTHTGEKPYECDDCGKTFTQSCSLLEHHRIHTGEKPYQCNMCPKAFRRSSHLLRHQRTHT 448

Human   450 GDKNVQEPEQGEAWKSRMESQLENVETPMSYKCNECERSFTQNTGLIEHQKIHTGEKPYQCNACG 514
            |||:...||.....:||:||..||:|||:||:||:|||||::.|.||||||:||||||::|..||
Mouse   449 GDKDFFVPEPYWESQSRVESHWENIETPVSYQCNDCERSFSRITSLIEHQKVHTGEKPFECQTCG 513

Human   515 KGFTRISYLVQHQRSHVGK 533
            |||||.|||:||||.|.||
Mouse   514 KGFTRPSYLIQHQRRHTGK 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZKSCAN3NP_001229823.1 SCAN 42..154 CDD:128708 90/114 (79%)
SCAN 42..130 CDD:280241 76/90 (84%)
KRAB 214..274 CDD:214630 36/59 (61%)
KRAB 217..252 CDD:279668 22/34 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..274 28/47 (60%)
zf-C2H2 314..336 CDD:278523 17/21 (81%)
C2H2 Zn finger 316..336 CDD:275368 17/19 (89%)
zf-H2C2_2 329..351 CDD:290200 19/21 (90%)
C2H2 Zn finger 344..364 CDD:275368 18/19 (95%)
zf-H2C2_2 356..381 CDD:290200 23/24 (96%)
COG5048 <368..515 CDD:227381 116/146 (79%)
C2H2 Zn finger 372..392 CDD:275368 19/19 (100%)
zf-H2C2_2 384..409 CDD:290200 24/24 (100%)
C2H2 Zn finger 400..420 CDD:275368 18/19 (95%)
zf-H2C2_2 412..437 CDD:290200 22/24 (92%)
C2H2 Zn finger 428..448 CDD:275368 17/19 (89%)
zf-C2H2 480..502 CDD:278523 15/21 (71%)
C2H2 Zn finger 482..502 CDD:275368 14/19 (74%)
zf-H2C2_2 495..519 CDD:290200 18/23 (78%)
C2H2 Zn finger 510..530 CDD:275368 15/19 (79%)
Zkscan3NP_001139250.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..49 9/21 (43%)
SCAN 47..159 CDD:128708 88/111 (79%)
KRAB_A-box 213..267 CDD:383038 34/53 (64%)
zf-C2H2 313..335 CDD:333835 17/21 (81%)
C2H2 Zn finger 315..335 CDD:275368 17/19 (89%)
zf-H2C2_2 328..350 CDD:372612 19/21 (90%)
zf-C2H2 341..363 CDD:333835 20/21 (95%)
C2H2 Zn finger 343..363 CDD:275368 18/19 (95%)
COG5048 <367..514 CDD:227381 116/146 (79%)
C2H2 Zn finger 371..391 CDD:275368 19/19 (100%)
C2H2 Zn finger 399..419 CDD:275368 18/19 (95%)
C2H2 Zn finger 427..447 CDD:275368 17/19 (89%)
C2H2 Zn finger 481..501 CDD:275368 14/19 (74%)
zf-C2H2 507..529 CDD:333835 15/21 (71%)
C2H2 Zn finger 509..529 CDD:275368 15/19 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 161 1.000 Domainoid score I31758
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130732
Inparanoid 1 1.050 774 1.000 Inparanoid score I8249
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG38165
OrthoDB 1 1.010 - - D117609at32523
OrthoFinder 1 1.000 - - FOG0009911
OrthoInspector 1 1.000 - - otm51979
orthoMCL 1 0.900 - - OOG6_125739
Panther 1 1.100 - - LDO PTHR23226
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R13804
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1515.470

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