| Sequence 1: | NP_001137229.1 | Gene: | LRRC27 / 80313 | HGNCID: | 29346 | Length: | 530 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_509042.1 | Gene: | lrch-1 / 180893 | WormBaseID: | WBGene00015779 | Length: | 638 | Species: | Caenorhabditis elegans |
| Alignment Length: | 544 | Identity: | 113/544 - (20%) |
|---|---|---|---|
| Similarity: | 184/544 - (33%) | Gaps: | 174/544 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Human 50 LDLSESGLCRLEE-VFRIPSLQQLHLQRNALCVIPQDFFQLLPNLTWLD------------LRY- 100
Human 101 ----------NRIKALPSGIGAHQHLKTLLLERNPIKMLPVELGSVTTLKALNLRHCPLEFPPQL 155
Human 156 VVQKGLVAIQRFL--RMWAVEHS--------LPRNPT--------SQEAPPVRE-MTLRDLPSPG 201
Human 202 LELSGDHASNQG----------------AVNAQDPEGAVMKEKASFLP---PVEKPDLSELRKSA 247
Human 248 -DSSENWPSEEEIRRFWKLRQEIVEHVKADVLGDQLLTRELPPNLKAALNIEKELPKPRHVFRRK 311
Human 312 TASSRSI---LPDLLSPYQMAIRAKRLEESRAAALRELQEKQALMEQQRREKRALQEWRERAQRM 373
Human 374 RKRKEELSKLLPPRRSMVASKIPSATDLIDNRKVPLNPPGKMKPSKEKSPQASKEMSALQERNLE 438
Human 439 EKIKQHVLQMREQRRFHGQAPLEEMRKAAEDLEIATELQDEVLKLKLGLT--LNKDRRRAALTGN 501
Human 502 LSLGLPAAQPQN--TFFNTKYGES 523 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LRRC27 | NP_001137229.1 | LRR 1 | 46..67 | 4/17 (24%) | |
| leucine-rich repeat | 49..68 | CDD:275378 | 4/18 (22%) | ||
| LRR_8 | 67..126 | CDD:290566 | 23/81 (28%) | ||
| LRR_4 | 67..108 | CDD:289563 | 17/63 (27%) | ||
| LRR 2 | 68..89 | 6/20 (30%) | |||
| leucine-rich repeat | 69..92 | CDD:275378 | 7/22 (32%) | ||
| LRR_4 | 91..127 | CDD:289563 | 15/58 (26%) | ||
| LRR 3 | 92..113 | 9/43 (21%) | |||
| leucine-rich repeat | 93..115 | CDD:275378 | 9/44 (20%) | ||
| LRR 4 | 115..136 | 7/20 (35%) | |||
| leucine-rich repeat | 116..138 | CDD:275378 | 7/21 (33%) | ||
| LRR 5 | 138..159 | 6/20 (30%) | |||
| leucine-rich repeat | 139..150 | CDD:275378 | 4/10 (40%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..215 | 11/61 (18%) | |||
| DUF3629 | <331..471 | CDD:289102 | 19/139 (14%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 402..432 | 5/29 (17%) | |||
| lrch-1 | NP_509042.1 | LRR | <64..>261 | CDD:227223 | 37/135 (27%) |
| leucine-rich repeat | 75..102 | CDD:275380 | |||
| leucine-rich repeat | 123..142 | CDD:275380 | 3/15 (20%) | ||
| leucine-rich repeat | 145..168 | CDD:275380 | 7/22 (32%) | ||
| leucine-rich repeat | 169..191 | CDD:275380 | 6/21 (29%) | ||
| leucine-rich repeat | 192..214 | CDD:275380 | 3/21 (14%) | ||
| leucine-rich repeat | 215..237 | CDD:275380 | 7/21 (33%) | ||
| CH | <544..623 | CDD:381763 | 6/22 (27%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||