DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STAM and Hrs

DIOPT Version :10

Sequence 1:NP_003464.1 Gene:STAM / 8027 HGNCID:11357 Length:540 Species:Homo sapiens
Sequence 2:NP_525099.3 Gene:Hrs / 33458 FlyBaseID:FBgn0031450 Length:760 Species:Drosophila melanogaster


Alignment Length:705 Identity:152/705 - (21%)
Similarity:228/705 - (32%) Gaps:230/705 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     9 FDQDVEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACV 73
            ||:::|.|||.:....||..||.|||::.|....||:...:|.:::|..:||.:..:|.:|.:.|
  Fly     6 FDKNLENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIV 70

Human    74 SNCGKIFHLEVCSRDFASEVSNVL-NKGHPKVCEKLKALMVEWTDEFKNDPQLSLISAMIKNLKE 137
            .|||...|.||.:::.....|:.| :..|..|.:|:..|:..|...|::..:...|...:..||.
  Fly    71 KNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAFRSSDKYQAIKDTMTILKA 135

Human   138 QGVTFPAI---------------------------------------------GSQAAEQ----- 152
            :|.|||.:                                             |...|:|     
  Fly   136 KGHTFPELREADAMFTADTAPNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPK 200

Human   153 --------------------------AKASP-------------ALVAKDPGTVANK-----KEE 173
                                      ||:.|             :.:|:...|.|.|     |||
  Fly   201 YGIEKEVRVCDGCFAALQRPTSGSGGAKSGPRPADSELPAEYLNSTLAQQVQTPARKTEQELKEE 265

Human   174 EDLAKAIELSLKEQRQQSTTLSTLYPSTSSLLTN-------------HQHEGRKVRAIYDFEAAE 225
            |:|..|:.||..|..||...|.:|.|:...:...             ||..          |.|.
  Fly   266 EELQLALALSQSEAEQQKPKLQSLPPAAYRMQQRSPSPEAPPEPKEYHQQP----------EEAT 320

Human   226 DNELT----------FKAGEIITVLDDSDPNWWKGETHQGIGLFPSNFVTADLTAEPEMIKTEKK 280
            :.||.          .|..|..::...|.|:... .|.|...:.|....:||.....|.....:.
  Fly   321 NPELAKYLNRSYWEQRKISESSSMASPSAPSPMP-PTPQPQQIMPLQVKSADEVQIDEFAANMRT 384

Human   281 TVQ---------------FSDDVQVETIEPEPEPAFIDEDKMDQLLQMLQSTDPSDD-------- 322
            .|:               .|:|..|:|:       |:....:..  |.|......||        
  Fly   385 QVEIFVNRMKSNSSRGRSISNDSSVQTL-------FMTLTSLHS--QQLSYIKEMDDKRMWYEQL 440

Human   323 QPDLPELLHLEAMCHQMGPLIDEKLEDIDRKHSELSELNVKVMEALSLYTKLMNEDPMYSMY--- 384
            |..|.::....|...|:.....|||..|..:...  :..:::.:.|.:..|...|   |..|   
  Fly   441 QDKLTQIKDSRAALDQLRQEHVEKLRRIAEEQER--QRQMQMAQKLDIMRKKKQE---YLQYQRQ 500

Human   385 ---AKLQNQPYYMQSSGVSGSQVYAGPPPSGAYLVAGNAQMSHLQSYSLPPEQLSSLSQAVVPPS 446
               .::|.|...||                   |.....:..:|...|.||       ...:|||
  Fly   501 LALQRIQEQEREMQ-------------------LRQEQQKAQYLMGQSAPP-------FPYMPPS 539

Human   447 ANP--ALPSQQTQAAYPNTMVSSVQGNTYPSQAPVYSP---------PPAATAAAATADV----- 495
            |.|  ..||.|....| |...:.|.|  |..|.|..:|         ||.....|....:     
  Fly   540 AVPQHGSPSHQLNNVY-NPYAAGVPG--YLPQGPAPAPNGHGQFQAIPPGMYNPAIQQPMPPNLQ 601

Human   496 ---TLYQNAGPN----MPQVPNYNLTSS-----TLPQPGGSQQPPQ-PQQPYSQK 537
               .:.|.|.|.    ||.:|.....::     .|||.....|||| |.||..|:
  Fly   602 PGGLMQQPAPPGNPQMMPPMPENQFANNPAAILQLPQQHSIAQPPQIPFQPQPQQ 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAMNP_003464.1 VHS_STAM1 9..139 CDD:340797 40/130 (31%)
SH3_STAM1 213..267 CDD:212897 11/63 (17%)
GAT_STAM1 301..377 CDD:410594 15/83 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..540 16/48 (33%)
HrsNP_525099.3 VHS_Hrs 4..141 CDD:340771 42/134 (31%)
FYVE_Hrs 157..217 CDD:277260 3/59 (5%)
GAT_Hrs 376..471 CDD:410592 19/103 (18%)
PABP-1234 <501..641 CDD:130689 37/168 (22%)

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