DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STAM and Gga

DIOPT Version :10

Sequence 1:NP_003464.1 Gene:STAM / 8027 HGNCID:11357 Length:540 Species:Homo sapiens
Sequence 2:NP_572571.1 Gene:Gga / 31902 FlyBaseID:FBgn0030141 Length:660 Species:Drosophila melanogaster


Alignment Length:591 Identity:104/591 - (17%)
Similarity:193/591 - (32%) Gaps:184/591 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   148 SAQQAEVFTKQIQQLQGEL------------QHLREEISLLEHEKESELKEMEQELHLAQAEIQN 200
            |.|..|:..|.:||:....            :..||.|..:|.|:...|:..::    |:..|.:
  Fly    15 SRQITELPPKALQQIFATCSATDMTRCSLVNKQFREVIEDMEDERAESLRSCQK----AKIFICD 75

Human   201 LRQA---------------------AADSATEHESDIASLQDDLCRLQNDLDDMERIRGDYEMEI 244
            .|:|                     ::||.:...|.|||.........:.....:..:...|.|.
  Fly    76 RRRAILEGVSTVTPSRLPRTPKNSESSDSGSASSSSIASTSSSEADSVSSSSKTKTKQQQTEREK 140

Human   245 ASLRAEMELKTSEPSNLSISDFSGIQDELHHLRERYNLLNEEYQALRESNSSLTGQLAE------ 303
            ...|..:..:|.  |:.|.:|.|||..      :..:.|:::|....:.|.:......|      
  Fly   141 ELRRRNISDRTK--SSSSSTDSSGIHS------KATSFLSDQYTDTTDPNWAFAFHFDEWLQEYD 197

Human   304 ------------LESDR--------TRRATERWLESHLLRSTMSSESQTSELDFPEPDPVMQL-L 347
                        ||.::        :.:....:.|:.|::...::.| .::......:|..:| :
  Fly   198 VNDVFFKNFCSFLEREKIEDPMSPSSYKGRTAYYENQLIQDKTTAMS-LADCQIVRLNPTAELEM 261

Human   348 RQQLLGAEEQMQDMQDKCKNLYCELEELQHHRRTSEEEQKRLQRELKC--AQNEVLRFQTSHSTQ 410
            |.|..|..|::.|...|.:|.:.                  :.::..|  |:..|..|   :...
  Fly   262 RNQSAGRIERLADRLSKIRNAHF------------------IFKDSVCYGARPPVTFF---YFLS 305

Human   411 HEELKSRLCTLQQKYDASQDEHSELLKVQMQLETELQQLRLLRCTPVESQSEKELMCRLQKLQAQ 475
            .....:|..|......||..|..|:|.:.          .|.|.|.::.|..:.:|.|       
  Fly   306 MMRRNTRALTFDNVQAASTIELHEVLNLS----------NLNRLTVIQPQQHQTIMVR------- 353

Human   476 HQCSVNEKEQLLEVQHHLHDKLR---------CHESEVHRLRSMVDCLREKNEKNSGIHLQLQEM 531
                    :|||.....|.|::|         |||.....|.::|                 ||.
  Fly   354 --------DQLLINWMKLPDQIRKRISVHLVGCHEFRPQNLYNVV-----------------QEW 393

Human   532 KGLYQ---FSRDELERQKHMYDQLEQDFLLCQQELTELKSSQSLCEEN-GNCSNKCDALLARLTE 592
            .||.:   |.:..::...:.|::. .:.:....::.|.:..:|....: ||..|:...:|.|.. 
  Fly   394 LGLAKPVVFKQISIDGGSYKYNEF-MNIIEHLHDIIEKRPPRSPMNRSFGNEQNEHSIVLERTC- 456

Human   593 LQDKFKASQEEIGH-------LQMEQCELLEDQRR----LQEEQGQLQ-------EELHRLTFPQ 639
                      .|.|       :|::.|   :..||    ::.|...:.       ..|.||..||
  Fly   457 ----------RIPHPKDRRVVIQLKYC---KPSRRMVLTIEREDSPIPVTTLTPVSSLSRLARPQ 508

Human   640 PKCGIL 645
            ....:|
  Fly   509 SAASVL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAMNP_003464.1 VHS_STAM1 9..139 CDD:340797
SH3_STAM1 213..267 CDD:212897 11/53 (21%)
GAT_STAM1 301..377 CDD:410594 15/102 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..540 9/42 (21%)
GgaNP_572571.1 VHS_GGA_metazoan 8..144 CDD:340769 24/132 (18%)
GAT_GGA_meta 201..283 CDD:410582 14/82 (17%)
Alpha_adaptinC2 543..644 CDD:197886
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.