DRSC/TRiP Functional Genomics Resources

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Protein Alignment EDEM3 and alpha-Man-Ib

DIOPT Version :10

Sequence 1:NP_001306889.1 Gene:EDEM3 / 80267 HGNCID:16787 Length:948 Species:Homo sapiens
Sequence 2:NP_651667.1 Gene:alpha-Man-Ib / 43436 FlyBaseID:FBgn0039634 Length:685 Species:Drosophila melanogaster


Alignment Length:490 Identity:142/490 - (28%)
Similarity:239/490 - (48%) Gaps:80/490 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    48 EKQKLGNQVLEMFDHAYGNYMEHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFS-------L 105
            |:|   :.|:..|.|::..|.::|:..|.|.|::                    ::|       |
  Fly   234 ERQ---SAVVAAFKHSWAGYKKYAWGHDNLKPIS--------------------QYSHEWFGLGL 275

Human   106 TLIDSLDTLVVLNKTKEFEDAVRKVLRDVNLDNDVVVSVFETNIRVLGGLLGGHSLAIMLKEKGE 170
            |::|||||:.::....||::....|.:.:..|....|::||..||||||||..:.|:      |:
  Fly   276 TIVDSLDTMYIMGLDDEFKEGRDWVEQSLRFDTKRDVNLFEVTIRVLGGLLSAYHLS------GD 334

Human   171 YMQWYNDELLQMAKQLGYKLLPAFNTTSGLPYPRINL-KFGIRKPEARTGTETDTCTACAGTLIL 234
            .|      .|..|.:||.:|||||.:.|.:||..:|| ......|:    ...|:.|:...|:.|
  Fly   335 TM------FLAKAAELGNRLLPAFQSPSNIPYSDVNLGDLSAHSPK----WSPDSSTSEVTTIQL 389

Human   235 EFAALSRFTGATIFEEYARKALDFLWEKRQRSSNLVGVTINIHTGDWVRKDS-GVGAGIDSYYEY 298
            ||..|||.|..:|:|:.|.|..:.:.: .:::..||.:.||.:||.:....: .:||..||||||
  Fly   390 EFRDLSRSTNISIYEQVAHKVNEKVHD-LEKNHGLVPIFINANTGTFRNYATISLGARGDSYYEY 453

Human   299 LLKAYVLLG---DDSFLERFNTHYDAIM-RYISQPPLLLDVHIHKPMLNARTW---MDALLAFFP 356
            |||.::..|   :|:.:..:....|.:: :.:.:.|....|:|.: ::|.:.:   ||.|..:.|
  Fly   454 LLKQWIQTGRKDNDNLILDYMQAVDGVLTQLMRRTPREHWVYIGE-LINGKDFKPKMDHLTCYLP 517

Human   357 GLQVLKGD----------IRPAIETHEMLYQVIKKH-------NFLPEAFTTDFRV--HWAQHPL 402
            |..:|...          .|..::|....|.:...|       ..|.|....|..|  :.|.:.|
  Fly   518 GTLILGHQNGMPDSHLILARDLLDTCYQTYMMNPTHLAAEISYFALTEKDDQDIYVKPNDAHNLL 582

Human   403 RPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAM---KDVRTGSHEDRMDSFFLA 464
            ||||.||.|:.|..||:..|.::|..:.:....:|:|..|:.:|   |:.::....|.|:||:::
  Fly   583 RPEFVESLYYFYSITGNRTYQDMGWKIFQAFETHAKVNAGYTSMGNVKNTQSTRLRDLMESFWMS 647

Human   465 EMFKYLYLLFADKEDIIFDIEDYIFTTEAHLLPLW 499
            |..||.||||:|....| |:|.::|.:|.|.||::
  Fly   648 ETLKYFYLLFSDDRKEI-DLEQWVFNSEGHPLPVY 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EDEM3NP_001306889.1 Glyco_hydro_47 59..498 CDD:460241 138/476 (29%)
PA_EDEM3_like 664..789 CDD:239041
PRK08581 <809..>936 CDD:236304
Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138 945..948
alpha-Man-IbNP_651667.1 Glyco_hydro_47 242..680 CDD:460241 138/476 (29%)
Blue background indicates that the domain is not in the aligned region.

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