DRSC/TRiP Functional Genomics Resources

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Protein Alignment RUFY1 and ccep-135

DIOPT Version :10

Sequence 1:NP_079434.3 Gene:RUFY1 / 80230 HGNCID:19760 Length:708 Species:Homo sapiens
Sequence 2:NP_741103.1 Gene:ccep-135 / 175416 WormBaseID:WBGene00019167 Length:456 Species:Caenorhabditis elegans


Alignment Length:402 Identity:92/402 - (22%)
Similarity:159/402 - (39%) Gaps:88/402 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   260 NVLDANLCLKGEDLDSQVGVIDFSLYLKDVQDLDGGKEHERITDVLDQKNYV-EELNRHLSCTVG 323
            :.:...:.:.|:||.:....:...|...:........|.||:      |:|. :.|..||     
 Worm   116 HAISDTVAVAGDDLSNVPAAVVIQLEKANRTIASQTLEIERL------KSYQNQNLETHL----- 169

Human   324 DLQTKIDGLEKTNSKLQEELSAATDRICSLQEEQQQL-----REQNELIRERSEKSVEITKQDTK 383
             |:.:|..|||       |:.:...|..    |||:|     ||.:.|:||:.|      .|...
 Worm   170 -LKKQIHDLEK-------EVRSGRSRFL----EQQELLAEMSREMDILLREKLE------MQRNS 216

Human   384 VELETYKQTRQGLDEMYSDVWKQLKEEKKVRLELEKELELQI-GMKTEMEIAMKLLEKDTH---- 443
            .|||                 |:.|:.|....||.|.||..: |..|...  :|..|.|..    
 Worm   217 QELE-----------------KKYKKAKFASRELAKILENDLCGTPTTSN--LKNFESDDEFFEE 262

Human   444 ----EKQDTLVALRQQ-----LEEVKAINLQMFHKAQNAES-----SLQQKNEAITSFEGKTNQV 494
                ||...|  .|||     ||:.:.|:   |.:|:||::     .|..:||.:.....:..::
 Worm   263 KSLFEKSRAL--SRQQIPNDLLEKTRKID---FSEAKNAKNQDLIDKLIDENENLQISLNREQKM 322

Human   495 MSSMKQMEERLQHSERARQGAEERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQ 559
            .||::      ...|::|:...:|...: :||..::|..:.:.||.....:....:|..|:.:.:
 Worm   323 TSSLQ------DDLEKSRRMVIDRDEHI-EELKMKLGKAETKASQCESDLTQTSSDLAMERLRCE 380

Human   560 ALQRELQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKM 624
            .|..|| ||.|  .:.|.....::....:...|:|:..:.|:........|:..|:.|..:|..:
 Worm   381 VLTGEL-HEID--GIFRNTQSTIQAYADDNDRLEDQCRQAQRTILTLNSKLEAQGIDLVTTKRTL 442

Human   625 EDIKEVNQALKG 636
            ..::|.|:|..|
 Worm   443 RALRETNEARSG 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUFY1NP_079434.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57
RUN_RUFY1 112..267 CDD:439056 0/6 (0%)
SMC_prok_B <373..>629 CDD:274008 59/274 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..522 5/28 (18%)
Interaction with RAB4. /evidence=ECO:0000269|PubMed:20534812 615..625 2/9 (22%)
FYVE_RUFY1 634..704 CDD:277297 1/3 (33%)
ccep-135NP_741103.1 SMC_N 134..>448 CDD:481474 85/376 (23%)
Blue background indicates that the domain is not in the aligned region.

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