DRSC/TRiP Functional Genomics Resources

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Protein Alignment RUFY1 and rufy1

DIOPT Version :10

Sequence 1:NP_079434.3 Gene:RUFY1 / 80230 HGNCID:19760 Length:708 Species:Homo sapiens
Sequence 2:XP_002667361.2 Gene:rufy1 / 100330077 ZFINID:ZDB-GENE-090421-4 Length:697 Species:Danio rerio


Alignment Length:718 Identity:445/718 - (61%)
Similarity:562/718 - (78%) Gaps:31/718 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MADREGGCAAGRG----RELEPELEPGPGPGSALEPGEEFEIVDRSQLPGPGDLRSATRPRAAEG 61
            |||.:.......|    :|.|||:         .|.|:| ::.:.:      |.....|| |...
Zfish     1 MADEDPNTKVESGDVPAKEEEPEV---------TETGQE-DVANNT------DELQKDRP-ADSS 48

Human    62 WSAPILTLARRATGNLSASCGSALRAAAGLGGGD-----SGDGTARAASKCQMMEERANLMHMMK 121
            ||||||:.||:||..||:...   ..:|||...|     |.|....||.|..::.||:||:.|||
Zfish    49 WSAPILSFARKATETLSSGVN---HYSAGLKTPDTTQQHSSDPVKIAAVKDPVVVERSNLLSMMK 110

Human   122 LSIKVLLQSALSLGRSLDADHAPLQQFFVVMEHCLKHGLKVKKSFIG-QNKSFFGPLELVEKLCP 185
            ||||||:||:|||||:||:::.||||||||:||||||||||:||||| ||||.:.|||::|||||
Zfish   111 LSIKVLIQSSLSLGRTLDSEYPPLQQFFVVLEHCLKHGLKVRKSFIGLQNKSIWAPLEMIEKLCP 175

Human   186 EASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGM 250
            |::|||||||::|.:||.:||.||||:|||||||:|||:||||:.:.||.|||||.||:|||||.
Zfish   176 ESADIATSVRDMPGIKTGLGRARAWLHLALMQKKIADYMKVLINRRDLLGEFYEPGALVMEEEGA 240

Human   251 VIVGLLVGLNVLDANLCLKGEDLDSQVGVIDFSLYLKDVQDLDGGKEHERITDVLDQKNYVEELN 315
            ||||:||||||:|||||:|||||||||.|||||:||||.|..:..::..::|.:||||:|:||||
Zfish   241 VIVGMLVGLNVIDANLCVKGEDLDSQVCVIDFSMYLKDPQATESKQDDSKMTAILDQKHYIEELN 305

Human   316 RHLSCTVGDLQTKIDGLEKTNSKLQEELSAATDRICSLQEEQQQLREQNELIRERSEKSVEITKQ 380
            |||||||.|||.|:|.||||||||.|||:||||||.:|:|||:||:::|..|.:.|::..|:|.|
Zfish   306 RHLSCTVTDLQAKMDSLEKTNSKLIEELTAATDRINALREEQEQLKQENANILQSSQRKEEVTLQ 370

Human   381 DTKVELETYKQTRQGLDEMYSDVWKQLKEEKKVRLELEKELELQIGMKTEMEIAMKLLEKDTHEK 445
            |::||||||:|||||||||||.||||.||||::|.||:||||||||:|.|||:||||||||||||
Zfish   371 DSQVELETYRQTRQGLDEMYSVVWKQYKEEKRIRQELQKELELQIGLKQEMEVAMKLLEKDTHEK 435

Human   446 QDTLVALRQQLEEVKAINLQMFHKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSER 510
            |||||||||||::||.:|||||:|||.::...|:|.|.:...|.|..|:.::||::|:|||:||.
Zfish   436 QDTLVALRQQLDQVKNLNLQMFNKAQASDRVAQKKEEDMVHLEKKMIQMEAAMKELEQRLQNSED 500

Human   511 ARQGAEERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSLL 575
            .::..:|:.::::.|:.|::.|||.:||.|....:.||.||.:||||||.||:|||.|:|.|:.|
Zfish   501 VQKNTDEQQNEIRTEMKGKVNALQKRLSDLDTLRAGLETELSAEKEQRQILQKELQREQDNSAEL 565

Human   576 RMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWL 640
            |.:|||::||:.||.:|:.||.:||::||||||||||||||||||||||||.||||:||||||||
Zfish   566 RTQLQQLQGLQTELLDLRQEKQQLQQLCEEQEQALQEMGLHLSQSKLKMEDFKEVNKALKGHAWL 630

Human   641 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLLQRCSS 705
            ||||||.|:||:||||||||||||||||.|:|..|||||||||||||||||||.||:||||| ||
Zfish   631 KDDEATQCKQCQKEFSISRRKHHCRNCGDIYCGNCSSNELALPSYPKPVRVCDVCHSLLLQR-SS 694

Human   706 TAS 708
            |.|
Zfish   695 TGS 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUFY1NP_079434.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..57 13/59 (22%)
RUN_RUFY1 112..267 CDD:439056 115/155 (74%)
SMC_prok_B <373..>629 CDD:274008 156/255 (61%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 493..522 10/28 (36%)
Interaction with RAB4. /evidence=ECO:0000269|PubMed:20534812 615..625 9/9 (100%)
FYVE_RUFY1 634..704 CDD:277297 60/69 (87%)
rufy1XP_002667361.2 RUN 101..257 CDD:459241 115/155 (74%)
Smc <317..>559 CDD:440809 143/241 (59%)
FYVE_RUFY1 624..694 CDD:277297 60/70 (86%)

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