DRSC/TRiP Functional Genomics Resources

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Protein Alignment CEP290 and mto1

DIOPT Version :9

Sequence 1:XP_011537058.1 Gene:CEP290 / 80184 HGNCID:29021 Length:2769 Species:Homo sapiens
Sequence 2:NP_588284.1 Gene:mto1 / 2539467 PomBaseID:SPCC417.07c Length:1115 Species:Schizosaccharomyces pombe


Alignment Length:1209 Identity:237/1209 - (19%)
Similarity:485/1209 - (40%) Gaps:310/1209 - (25%)


- Green bases have known domain annotations that are detailed below.


Human  1750 NIRIILETRATCKSLEEKLK-----EKESALRLAEQNILSRDKVINELRLRLPATAEREKLIAEL 1809
            |..::::..|.....:|:::     .||.:.:|....  |:|:...|...:.....:|:.|.::.
pombe    12 NFNVLVDNLAGLSLTDEEVRRILSPRKEGSRQLPSST--SKDEDSEEASHKYDFEIDRDSLKSDS 74

Human  1810 GRKEME-----PKSHHTLKIAHQTIANMQARLNQKEEV-----------LKKYQRLLEKAREEQR 1858
            |...:.     |.|...|:...:::    .:||.::|.           ...:.||.:....:..
pombe    75 GSPRLHQNATAPTSSTPLQSPDESV----NKLNSEDEEGNSSVAPFFLDTTNFDRLNDNITTDDE 135

Human  1859 EI------------VKKHEEDLHILHHRLELQADSSLNKFKQTAWDLMKQSP----------TPV 1901
            ::            .:::|||   .::..:..:|.|...:..::.|   |.|          ||:
pombe   136 QLSPVLTANQGFQSQEQYEED---SYNNYDYTSDPSSPNYISSSLD---QLPHLDDEDDLQLTPI 194

Human  1902 PTNKHFIRLAEMEQTVAEQDDSLSSLLV----------KLKKVSQDLERQREITELKVKEFENI- 1955
            ...::::...:...|.| ....:|.:|:          :...::::.|..:..:.|.:||..|: 
pombe   195 KEERNYLHSQDAPTTNA-LSKKISDILIPASAMKDLKDRKNALAKEFEESQPGSSLTLKEQANVI 258

Human  1956 ----------KL-------QLQENHEDEVKKVKAEVEDLKYLLDQSQ-------KESQCLKSELQ 1996
                      ||       ||.:.|:.||:.:..:..|||.|..:.|       |:...|:|.::
pombe   259 DNLRKEVFGLKLKCYFLYDQLNKFHDQEVQDIMKQNIDLKTLTMELQRAVAGYEKKISGLESRIK 323

Human  1997 AQKEANSRAPTTTMRNLVERLKSQLALKEKQQKALS------RALLELRAEMTAAAEERIISATS 2055
            ..:..|...|:....||:       .|:.:..:|||      ||...||.|   .:::...|..:
pombe   324 PDQSFNLSTPSPAPSNLI-------TLQSRYSQALSELETTKRAFAALRKE---KSKKTNYSVGA 378

Human  2056 QKEAHLNVQQIVDRHTRELKTQVEDLNENLLKL-KEALKTSKNRENSLTDNLNDLNNELQKKQKA 2119
            ..|....:..::|...||.:..:::|....::| |:....:||.:..:.:.|...|..|:.....
pombe   379 YNEDRNVLSNMLDNERREKEALLQELESLRVQLSKKVPMPAKNTDERVIETLQRSNELLRMDISM 443

Human  2120 YNKILREKEEIDQENDELKRQIKRLTSGLQGKPLT------DNKQSLIEELQRKVKKLENQLEGK 2178
            .|:.|..::   ||||.|.:|::.||..|....:.      .:|..|.:.:.  |.:::.| |..
pombe   444 QNEALLLRK---QENDRLVKQVEELTVALNSGKMNAIVEAESSKNELWDSMM--VSRMKTQ-EQS 502

Human  2179 VEEVDL-KPMK--EKNAKEELIRWEEGKKWQAKIEGIRNKLKEKEGEVFTLTKQLNTLKDLFAKA 2240
            :|...| |.::  |::.:.:|:|.|:  :|:..::.::..::|       :|::|...|::.:|:
pombe   503 IELTRLYKQLQDIEEDYENKLMRMEQ--QWREDVDQLQEYVEE-------ITQELQDTKEVLSKS 558

Human  2241 DKEKLTLQRKLKTTGMTVDQVLGIRALESEKELEELKKRNLDLENDILYMRAHQALPRDSVVEDL 2305
            .||           ....::|:|....|:|:|:|:.:|...:.|..|...:.......|.:.:  
pombe   559 SKE-----------SDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQ-- 610

Human  2306 HLQNRY---------LQEKLHALEKQFSK---DTYSKPSQ--NQISGIESD-DHCQREQE----- 2350
             |..||         ||::|..||::.:|   |:.||.|.  .|:...|:: |..::|.|     
pombe   611 -LSERYNDKCHEFDELQKRLQTLEEENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKENEENKQV 674

Human  2351 --LQKENLKLSSEN-IELKFQLEQANKDLPRLKNQVRDL----KEMCEFLKKEKAEVQRKLGHVR 2408
              |::..|..|::| :.|..|:|..|..|.:||.::..:    :.:.::|.              
pombe   675 IALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLS-------------- 725

Human  2409 GSGRSGKTIPELEKTIGLMKKVVEKVQRENEQLKKASGILTSEK--MANIEQENEK---LKAELE 2468
                            .|.::..:::...|::|::..|||:|..  .:.||:.|.:   |:...:
pombe   726 ----------------NLKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQYVTLRENFD 774

Human  2469 KLK----------------AHLGHQLSMHYESKTK---GTEKIIAENERLRKELKKETDAAEKLR 2514
            .|:                .||..|:....:...|   ||:|::.:.....:.||::|::.|.|.
pombe   775 SLQNAIMETFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLV 839

Human  2515 IAKNNLEIL-----NEKMTVQLEETGKRLQFAESRG--PQLEGADSKSWKSIVVTRMYETKL--- 2569
            ..|..|:.|     ..|..:|||     |:...|:.  ..|.|:.|.|.:|    :..|.||   
pombe   840 SEKKELKNLLDAERRSKKAIQLE-----LENLSSQAFRRNLSGSSSPSERS----QSRELKLLQA 895

Human  2570 --KELETDIAKKNQSITDLKQLVKEATE--------------------REQKVNKYNEDLEQQIK 2612
              |.|:..:.::|..|   |.:|...|:                    ..|.||....:|::.|:
pombe   896 SEKRLKEQVEERNSLI---KNIVTRFTQLNTGSKPVNTNVEALTTISSMNQAVNMNFRELDKSIQ 957

Human  2613 ILKHVPEGAETEQGLKRELQ----VLRLANHQLD--KEKAELIHQIEANKDQSGAESTIPDADQL 2671
            ..|...:..|.|  .|.||:    ||...:.:|.  :|:.:|:        .:|:.|:||::.:.
pombe   958 EFKRKCQSMERE--FKTELRKLDGVLEARSKRLSQLEERVKLL--------GAGSTSSIPNSPRA 1012

Human  2672 KEKIK-DLE-TQLKMSDLEKQHLKEEIKKLKKELENFDPSFFEEIEDLKYNYKEE---------- 2724
            .:::. |.| .:|..:..:|..::..|..||::.|.....:...:.::::..|.|          
pombe  1013 SKRVSLDSEDKKLVPASPDKSAVQRGITALKRDAEGMSHIWQLRLREMEFQLKAEQEGRKRDKLG 1077

Human  2725 --------VKKNILLEEKVKKLSEQLGVELTSPVAASEE 2755
                    :::|..|..::|...|.   ...||..:|:|
pombe  1078 ARERLQDLIRQNRSLSRQIKTDKES---NSRSPSISSQE 1113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CEP290XP_011537058.1 SMC_prok_B 843..1562 CDD:274008
SMC_prok_B 1369..2176 CDD:274008 95/516 (18%)
CEP209_CC5 1576..1703 CDD:293182
Smc 1927..2683 CDD:224117 188/897 (21%)
DUF342 <2067..2151 CDD:302792 22/84 (26%)
mto1NP_588284.1 Cnn_1N 252..319 CDD:285263 16/66 (24%)
Fib_alpha 511..611 CDD:285864 22/122 (18%)
Mto2_bdg 1052..1101 CDD:289572 5/48 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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