DRSC/TRiP Functional Genomics Resources

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Protein Alignment RUBCNL and Rubicon

DIOPT Version :10

Sequence 1:NP_079389.2 Gene:RUBCNL / 80183 HGNCID:20420 Length:662 Species:Homo sapiens
Sequence 2:NP_572496.1 Gene:Rubicon / 31803 FlyBaseID:FBgn0030055 Length:827 Species:Drosophila melanogaster


Alignment Length:681 Identity:174/681 - (25%)
Similarity:271/681 - (39%) Gaps:209/681 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    29 SPR---LLNTDHPPCQLDIRLMRHKAVWIN--PQDVQQQPQDLQSQVPAAGNS-----GTHF--- 80
            |||   |:|.|      ||:      :|.:  ||:|.::..:...|...|..|     |:.|   
  Fly   295 SPRRIQLINCD------DIK------IWTDQTPQEVPEEVHEKLQQASKASTSVGGYLGSFFGSP 347

Human    81 ----------VTDAASPSG-----------------------PSPSCLGDSLAETT-LSEDTTDS 111
                      |.|..:.||                       ...|.|.::.:.|. :|....|.
  Fly   348 PLYTSWFHRGVGDDLNASGDGGMLDTFLPVNGRKLKKQHTLFEGVSMLDEAASSTACISSAPWDI 412

Human   112 VGSASPHGSSEKSSSFSLSSTEVHMVRPGYSHRVSLPTSPGILATSPYPETDSAFFEPSHLTSAA 176
            .|||....:|..:||                   |:..:||           |...:...|.|  
  Fly   413 QGSAGDSTTSTTASS-------------------SVSITPG-----------SDKMDQQSLAS-- 445

Human   177 DEGAVQVSRRTISSNSFSPEVFVLPVDVEKENAHFYVADMIISAMEKMKCNILSQQQTESWSKEV 241
               .:|:||:|.::           ..:|||||||.:::..|:|:|.:|           ||:.:
  Fly   446 ---FLQMSRQTHNN-----------TQLEKENAHFRISEACITAIEHVK-----------WSRRL 485

Human   242 SGLLGSDQPDSEMTFDTNI----KQESGSSTSSYSGYEGCAVLQVSPVTETRTYHDVKEICKCDV 302
            :...|   |.|....:.|:    :|..|....::|. |...:..:|..:|               
  Fly   486 ATPAG---PTSHNLSEPNLMPYAEQIPGGGMQNHSA-EAVGLQLISRFSE--------------- 531

Human   303 DEFVILELGDFNDITETCSCSCSSSKSVTYEPDFNSAELLAKELYRVFQKCWILSVVNSQLAGSL 367
                                                     ::|.|:....|::|.         
  Fly   532 -----------------------------------------QQLPRLGHLKWLVSE--------- 546

Human   368 SAAGSIVVNEECVRKDFESSMNVVQEIKFKSRIRGTEDWAPPRFQIIFNIHPPLKRDLVVAAQNF 432
            ..|...::.....::|.|.:          |..|||..|||||.||||..||...|..|:..||.
  Fly   547 QEAPQQLLPLPTPKQDHEQA----------SLTRGTSSWAPPRQQIIFTEHPSESRSKVLQKQNH 601

Human   433 FCAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESCIPARILMMWDFKKYYVSNFSKQLLDSI 497
            .|||||..|.....:..|||.|||||.|..||....|.||||||..|||:.|.|.:|:.:|::.:
  Fly   602 RCAGCGMRVAKHLQQHFRYCTYLGKYLCTGCHRNQISAIPARILRSWDFRCYPVCSFAYRLIEQM 666

Human   498 WHQPIFNLLSIGQSLYAKAKELDRVKEIQEQLFHIKKLLKTCRFANSALKEFEQVPGHLTDELHL 562
            :..|:|::..:...|| |.|||.:.::.:.||..:|..:..||||......|..:|.|:|.:..:
  Fly   667 YAFPLFHVPDLNSQLY-KHKELAKARKRRLQLQAVKGFIANCRFATREQSFFNAIPAHITQDPDM 730

Human   563 FSLEDLVRIKKGLLAPLLKDILKASLAHVAGCELCQGKGFICEFCQNTTVIFPFQTATCRRCSAC 627
            :|:.|.|.::...:...:|:::..|..||..|.||.|:.|:||.|:...:|:|:|... :||..|
  Fly   731 WSMCDFVDVQNTSMNRSIKEVIALSEQHVHNCVLCTGRAFVCEHCKGGELIYPWQRKV-QRCDRC 794

Human   628 RACFHKQCF--------QSSECPRCARITAR 650
            .||||..|:        |:..||||:|:.:|
  Fly   795 GACFHNGCWKVRSRCRNQNDPCPRCSRLQSR 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RUBCNLNP_079389.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..131 21/114 (18%)
Interaction with UVRAG. /evidence=ECO:0000269|PubMed:28306502 196..235 11/38 (29%)
zf-RING_9 450..649 CDD:464030 76/206 (37%)
RubiconNP_572496.1 RUN_RUBCN 50..207 CDD:439048
zf-RING_9 619..824 CDD:464030 76/206 (37%)
Blue background indicates that the domain is not in the aligned region.

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