DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO19 and Myo19

DIOPT Version :9

Sequence 1:XP_011523588.1 Gene:MYO19 / 80179 HGNCID:26234 Length:1047 Species:Homo sapiens
Sequence 2:NP_001157208.1 Gene:Myo19 / 497974 RGDID:1559961 Length:964 Species:Rattus norvegicus


Alignment Length:1041 Identity:786/1041 - (75%)
Similarity:854/1041 - (82%) Gaps:80/1041 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLQQVNGHNPGSDGQAREYLREDLQEFLGGEVLLYKLDDLTRVNPVTLETVLRCLQARYMADTFY 65
            |.||||||:.|||.|.|..|:.||:|||||||.|::|||||:|||||||||||||||||..|.||
  Rat     1 MHQQVNGHSLGSDTQGRTSLKGDLREFLGGEVPLHQLDDLTKVNPVTLETVLRCLQARYTEDIFY 65

Human    66 TNAGCTLVALNPFKPVPQLYSPELMREYHAAPQPQQCGHSESASATACPIGAGRILNHEELTTGQ 130
            ||||||||||||||.:||||:||||:|||||||||                              
  Rat    66 TNAGCTLVALNPFKHIPQLYAPELMQEYHAAPQPQ------------------------------ 100

Human   131 KKLKPHVFTVGEQTYRNVKSLIEPVNQSIVVSGESGAGKTWTSRCLMKFYAVVATSPASWESHKI 195
             |||||:|||||||||||||||||:|||||||||||||||||||||||||||||.||.|.|:||:
  Rat   101 -KLKPHIFTVGEQTYRNVKSLIEPINQSIVVSGESGAGKTWTSRCLMKFYAVVAASPTSCENHKM 164

Human   196 AERIEQRILNSNPVMEAFGNACTLRNNNSSRFGKFIQLQLNRAQQMTGAAVQTYLLEKTRVACQA 260
            |||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   165 AERIEERILNSNPVMEAFGNACTLRNNNSSRFGKFIQLQLNRAQQMTGAAVQTYLLEKTRVACQA 229

Human   261 SSERNFHIFYQICKGASEDERLQWHLPEGAAFSWLPNPERSLEEDCFEVTREAMLHLGIDTPTQN 325
            :|||||||||||||||:::|||||.||||.|||||||||.|||||||||||||||||||||||||
  Rat   230 ASERNFHIFYQICKGATKEERLQWCLPEGTAFSWLPNPESSLEEDCFEVTREAMLHLGIDTPTQN 294

Human   326 NIFKTAPEQQEGIDRMAWQSRKGGHFREVAMQWKVTLTSRWGLLRHCQVLAGLLHLGNIQFAASE 390
            ||||                                            ||||||||||:.|..||
  Rat   295 NIFK--------------------------------------------VLAGLLHLGNVHFVDSE 315

Human   391 DEAQPCQPMDDAKCEDSVRTAASLLGLPEDVLLEMVQIRTIRAGRQQQVFRKPCARAECDTRRDC 455
            |||||||.||..|  .||||:|.||.||:::|||.:|||||:||:|||||:|||:||||||||||
  Rat   316 DEAQPCQLMDGTK--GSVRTSALLLQLPDNMLLESMQIRTIKAGKQQQVFQKPCSRAECDTRRDC 378

Human   456 LAKLIYARLFDWLVSVINSSICADTDSWTTFIGLLDVYGFESFPDNSLEQLCINYANEKLQQHFV 520
            ||||||||||||||||||||||||..|||.|||||||||||||||||||||||||||||||||||
  Rat   379 LAKLIYARLFDWLVSVINSSICADFSSWTAFIGLLDVYGFESFPDNSLEQLCINYANEKLQQHFV 443

Human   521 AHYLRAQQEEYAVEGLEWSFINYQDNQPCLDLIEGSPISICSLINEECRLNRPSSAAQLQTRIET 585
            |||||||||||.||||||||:||||||.||||:|||||||||||||||||||||||||||||||:
  Rat   444 AHYLRAQQEEYEVEGLEWSFVNYQDNQTCLDLLEGSPISICSLINEECRLNRPSSAAQLQTRIES 508

Human   586 ALAGSPCLGHNKLSREPSFIVVHYAGPVRYHTAGLVEKNKDPIPPELTRLLQQSQDPLLMGLFPT 650
            .|||.||||||||||||||:|:|:||||||.|||||||||||:|||||.|||||||||||.|||.
  Rat   509 TLAGRPCLGHNKLSREPSFVVMHFAGPVRYCTAGLVEKNKDPVPPELTGLLQQSQDPLLMMLFPA 573

Human   651 NPKEKTQEEPPGQSRAPVLTVVSKFKASLEQLLQVLHSTTPHYIRCIKPNSQGQAQTFLQEEVLS 715
            ||:||||||..||||||.|||||||||||||||||||.||||||||||||||.|.|||||||||:
  Rat   574 NPEEKTQEELSGQSRAPALTVVSKFKASLEQLLQVLHKTTPHYIRCIKPNSQSQPQTFLQEEVLN 638

Human   716 QLEACGLVETIHISAAGFPIRVSHRNFVERYKLLRRLHPCTSSGPDSPYPAKGLPEWCPHSEEAT 780
            ||||||||||||||||||||||||:||:||||||.||.|.||||..|..||||..|....::|||
  Rat   639 QLEACGLVETIHISAAGFPIRVSHQNFMERYKLLTRLRPRTSSGLRSLCPAKGSSEQPLCAKEAT 703

Human   781 LEPLIQDILHTLPVLTQAAAITGDSAEAMPAPMHCGRTKVFMTDSMLELLECGRARVLEQCARCI 845
            |:||:|||||.||.|.|.|....|.|:....|::|||||:|||||||||||||||::||||||||
  Rat   704 LQPLLQDILHALPALIQTATTPSDPAKTAQIPLYCGRTKIFMTDSMLELLECGRAQMLEQCARCI 768

Human   846 QGGWRRHRHREQERQWRAVMLIQAAIRSWLTRKHIQRLHAAATVIKRAWQKWRIRMACLAAKELD 910
            |.||||||.::||:|.||.::||||.|||||||||:|||.||||||.||.||||||||||:||||
  Rat   769 QCGWRRHRLQKQEKQRRAAVIIQAAFRSWLTRKHIRRLHIAATVIKHAWHKWRIRMACLASKELD 833

Human   911 GVEEKHFSQAPCSL--STSPLQTRLLEAIIRLWPLGLVLANTAMGVGSFQRKLVVWACLQLPRGS 973
            |:|||...|||.:|  |.||..||.|.|||.||||||||||:|.|:..||||||..|||:||...
  Rat   834 GMEEKLMPQAPGTLRSSLSPAHTRFLGAIIHLWPLGLVLANSADGMRGFQRKLVAHACLRLPASG 898

Human   974 PSSYTVQTAQDQAGVTSIRALPQGSIKFHCRKSPLRYADICPEPSPYSITGFNQI-LLERHRLIH 1037
            ||:......|||||:||||||||||||||||||||:||||||:||..::|||||| ||||||.:.
  Rat   899 PSNKVQTPQQDQAGITSIRALPQGSIKFHCRKSPLQYADICPDPSASNVTGFNQILLLERHRPVQ 963

Human  1038 V 1038
            |
  Rat   964 V 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO19XP_011523588.1 MYSc_Myo19 49..823 CDD:276846 592/773 (77%)
Myo19NP_001157208.1 MYSc 38..754 CDD:214580 610/792 (77%)
MYSc_Myo19 49..746 CDD:276846 592/773 (77%)
IQ 784..804 CDD:279006 14/19 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83685431
Domainoid 1 1.000 1156 1.000 Domainoid score I1088
eggNOG 1 0.900 - - E2759_KOG0160
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H49819
Inparanoid 1 1.050 1578 1.000 Inparanoid score I2463
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG51417
OrthoDB 1 1.010 - - D106855at7742
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - oto131703
orthoMCL 1 0.900 - - OOG6_112629
Panther 1 1.100 - - LDO PTHR13140
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X8679
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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