DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PHC3 and ph-p

DIOPT Version :9

Sequence 1:XP_005247846.1 Gene:PHC3 / 80012 HGNCID:15682 Length:1011 Species:Homo sapiens
Sequence 2:NP_476871.2 Gene:ph-p / 31181 FlyBaseID:FBgn0004861 Length:1589 Species:Drosophila melanogaster


Alignment Length:1159 Identity:272/1159 - (23%)
Similarity:420/1159 - (36%) Gaps:311/1159 - (26%)


- Green bases have known domain annotations that are detailed below.


Human     8 DHSTAMDTEPNPGTSSVS-----------TTTSSTTTTTITTSSSRMQQPQISVYSGSDRHAVQV 61
            |.:..|..:..|.|.::.           |.|.:...|.:...:.:.||.|..|.:.:     |.
  Fly   573 DGTQGMFIQQQPATQTLQTQQNQIIQCNVTQTPTKARTQLDALAPKQQQQQQQVGTTN-----QT 632

Human    62 IQQALHRPPSSAAQYLQQMYAAQQQH----LMLH------------TAALQQQHLSSSQLQ---- 106
            .||.|....:...|..||:.||..|.    :|.|            |...|.|.|..::::    
  Fly   633 QQQQLAVATAQLQQQQQQLTAAALQRPGAPVMPHNGTQVRPASSVSTQTAQNQSLLKAKMRNKQQ 697

Human   107 ----SLAAVQASLSSGRPSTSPTGSVT-----QQSSMSQTSIN--------LSTSPTPAQLISRS 154
                :||.::..:..........|.:|     ||::..|..:|        :||:.||..|.:..
  Fly   698 PVRPALATLKTEIGQVAGQNKVVGHLTTVQQQQQATNLQQVVNAAGNKMVVMSTTGTPITLQNGQ 762

Human   155 QASSSTSGSITQQTMLLGSTSPTLTASQAQMYLRAQMLIFTPATTVAAVQSDIPVVSSSSSSSCQ 219
            ...::|:..:.:|       ...|...|.|..|:.|.::   ...:||:|           ...|
  Fly   763 TLHAATAAGVDKQ-------QQQLQLFQKQQILQQQQML---QQQIAAIQ-----------MQQQ 806

Human   220 SAATQVQNLTLRSQKLGVLSSSQNGPPKSTSQTQSLTICHNKTTVTSSKISQRDPSPESNKKGES 284
            .||.|.|     .|:...:|..|     ..:..|...:...:..|..::..||    |..::...
  Fly   807 QAAVQAQ-----QQQQQQVSQQQ-----QVNAQQQQAVAQQQQAVAQAQQQQR----EQQQQVAQ 857

Human   285 PSLESRSTAVTRTSSIHQLIAPASYSPIQPHSLIKHQQIPLHSPPSKVSHHQLILQQQQQQIQ-- 347
            ...:.:......|..|.| :||..:  |..|...:.||:          |:|||.||.|||.|  
  Fly   858 AQAQHQQALANATQQILQ-VAPNQF--ITSHQQQQQQQL----------HNQLIQQQLQQQAQAQ 909

Human   348 -----PITLQNSTQDPPPSQHCIP---LQNHGLPPAPSNAQSQH--CSPIQSHPSPLTVSPNQSQ 402
                 ....|...|.....|:.|.   :|..|.....::.|.||  ...:|....|.:||.:.:.
  Fly   910 VQAQVQAQAQQQQQQREQQQNIIQQIVVQQSGATSQQTSQQQQHHQSGQLQLSSVPFSVSSSTTP 974

Human   403 -------------SAQQSVVVSPPPPHSPSQSPT---IIIHPQ---------------------A 430
                         ||..::..:..|....|.|||   :.|..|                     |
  Fly   975 AGIATSSALQAALSASGAIFQTAKPGTCSSSSPTSSVVTITNQSSTPLVTSSTVASIQQAQTQSA 1039

Human   431 LIQPH-PLVSSAL------QP-GPNLQQSTANQVQA-TAQLNLP-SHLPLPASPVVHIGPVQQSA 485
            .:..| .|:|:.:      || ||.....|.|.:.| |:.:|.. .|  |..:|.|.:.....:.
  Fly  1040 QVHQHQQLISATIAGGTQQQPQGPPSLTPTTNPILAMTSMMNATVGH--LSTAPPVTVSVTSTAV 1102

Human   486 LVSPGQQIV--SPSHQQYSSLQSSP-------------IPIASP------PQMSTSPPAQIPPLP 529
            ..||||.::  :.|.....|:.::|             :||.||      ....|:|.:..|...
  Fly  1103 TSSPGQLVLLSTASSGGGGSIPATPTKETPSKGPTATLVPIGSPKTPVSGKDTCTTPKSSTPATV 1167

Human   530 LQSMQSLQVQPEILSQGQVLVQNALVSEEELPAAEALVQLPFQTLPPPQTVAVNLQVQPPAPVDP 594
            ..|:::.....|.||.|.               |......|.:....|.:...|..||||:...|
  Fly  1168 SASVEASSSTGEALSNGD---------------ASDRSSTPSKGATTPTSKQSNAAVQPPSSTTP 1217

Human   595 PVGMHLNQCHLHKVFSLKVYQVEDVCEEEMPEESDECVRMDRTPPPPTLSPAAITVGRGEDLTSE 659
                                  ..|..:|.|:.: .|..:  |....|.:...||.|.|...|: 
  Fly  1218 ----------------------NSVSGKEEPKLA-TCGSL--TSATSTSTTTTITNGIGVARTT- 1256

Human   660 HPLLEQVELPAVASVSASVIKSPSDPSHVSVPPPPLLLPAATTRSNSTSMHSSIPSIENKPPQAI 724
                        ||.:.|...:.:..|...:         .:..|.:|:..|||.:.....|:|:
  Fly  1257 ------------ASTAVSTASTTTTSSGTFI---------TSCTSTTTTTTSSISNGSKDLPKAM 1300

Human   725 VKPQILTHVIEGFVIQEGLEPFPVSRSSL----LIEQPVKKRPLLDNQVINSVCVQPELQNNTKH 785
            :||.:|||||:||:|||..|||||:|...    :.::|.||:.                      
  Fly  1301 IKPNVLTHVIDGFIIQEANEPFPVTRQRYADKDVSDEPPKKKA---------------------- 1343

Human   786 ADNSSDTEMEDMIAEETLEEMDSELLKCEFCGKMGYANEFLRSKRFCTMSCAKRY-----NVSCS 845
                  |..||:..........|:::.||.||||.:..: |:.||:|:..|:::.     .|...
  Fly  1344 ------TMQEDIKLSGIASAPGSDMVACEQCGKMEHKAK-LKRKRYCSPGCSRQAKNGIGGVGSG 1401

Human   846 KKFALSRWN----------RKPDNQSLGHRGRRPSGPD--------GAAREHILRQLPITYP-SA 891
            :...|....          .:.|......:.:..:.|.        ||:.|.....||:... ||
  Fly  1402 ETNGLGTGGIVGVDAMALVDRLDEAMAEEKMQTEATPKLSESFPILGASTEVPPMSLPVQAAISA 1466

Human   892 EEDLASHEDSVPSAMTTRLRRQSERERERELRDVRIRKMPENSDLLPVAQTEPSIWTVDDVWAFI 956
            ...||....|..|.....|         ..|..|.....|::|::....:...|.|:||||..||
  Fly  1467 PSPLAMPLGSPLSVALPTL---------APLSVVTSGAAPKSSEVNGTDRPPISSWSVDDVSNFI 1522

Human   957 HSLPGCQDIADEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKICARINSLKE 1010
            ..||||||..|:|..|||||||||||||.||::||.:||||||||.|::.|:||
  Fly  1523 RELPGCQDYVDDFIQQEIDGQALLLLKEKHLVNAMGMKLGPALKIVAKVESIKE 1576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PHC3XP_005247846.1 SAM_Ph1,2,3 942..1010 CDD:188976 43/67 (64%)
SAM 944..1011 CDD:197735 45/67 (67%)
ph-pNP_476871.2 SAM_Ph1,2,3 1508..1576 CDD:188976 43/67 (64%)
SAM 1511..1576 CDD:197735 43/64 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158172
Domainoid 1 1.000 89 1.000 Domainoid score I7830
eggNOG 1 0.900 - - E1_28JS2
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 203 1.000 Inparanoid score I3748
Isobase 1 0.950 - 0 Normalized mean entropy S7881
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8548
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4720
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.830

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