DRSC/TRiP Functional Genomics Resources

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Protein Alignment FRMD1 and Frmd1

DIOPT Version :10

Sequence 1:XP_011534439.1 Gene:FRMD1 / 79981 HGNCID:21240 Length:614 Species:Homo sapiens
Sequence 2:XP_063136953.1 Gene:Frmd1 / 689709 RGDID:1588779 Length:375 Species:Rattus norvegicus


Alignment Length:363 Identity:240/363 - (66%)
Similarity:289/363 - (79%) Gaps:5/363 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    91 MASEHRDVLVLLPSREQLRLAVGVKATGRELFQQVCNVASIRDAQFFGLCVVRNNEYIFMDLEQK 155
            |.||.||:||||||.|||||:|.|.|||::||||||::|.||:|..|||.|:|.|||:|:||:||
  Rat    13 MNSELRDILVLLPSWEQLRLSVQVAATGQDLFQQVCDMAHIREAHLFGLSVLRENEYVFVDLKQK 77

Human   156 LSKYFSKDWKKERNEGNEKPRAPFVAFLRVQHYVENGRVISDHRARHLYYCHLKERVLRSQCAHR 220
            ||||||||||.:.::|:::|||||:||.|||.|||||:.|.|..|.|||||||||:||||:|..|
  Rat    78 LSKYFSKDWKTDTHKGDKRPRAPFIAFFRVQFYVENGKAIRDKTALHLYYCHLKEQVLRSRCMRR 142

Human   221 EEAYFLLAACALQADLGEHRESAHAGRYFEPHSYFPQWIITKRGIDYILRHMPTLHRERQGLSPK 285
            |||||||||..||||||..:||.|.|||||||:|||||||.||||||||||:|.:|||:|||:.|
  Rat   143 EEAYFLLAAYGLQADLGNQQESVHVGRYFEPHAYFPQWIINKRGIDYILRHVPAMHREQQGLTAK 207

Human   286 EAMLCFIQEACRLEDVPVHFFRLHKDKKEGRPTVILGLALRGVHIYQEVDRAPQLLYDLPWPHVG 350
            ||:..||::||:|||||.||||::|:|||...||:|||.|:||.||||||..||||.|.||..:.
  Rat   208 EAIRRFIRDACQLEDVPAHFFRMYKEKKEDESTVLLGLTLKGVTIYQEVDYTPQLLCDFPWSRIS 272

Human   351 KLAFLGKKLEIQLDGLPAAQKLVYYTGCTWRSRHLLHLLRASHQLHLRVRPTLQQLRQREEAEEK 415
            |:.|||||||||.:||.|.|||:.|||..||||:||.|||::|||||.::|.||.|:|.||||:|
  Rat   273 KVTFLGKKLEIQPEGLLATQKLLLYTGHAWRSRYLLQLLRSTHQLHLSLKPVLQWLQQLEEAEKK 337

Human   416 QHYRESYISD-ELELDLASRSFPG---SGVSSQHCPHC 449
            . |||||||| ||:||...|...|   :..|.||..||
  Rat   338 S-YRESYISDLELDLDPDHRDALGTEDNKSSRQHLLHC 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRMD1XP_011534439.1 FERM_F1_FRMD1 95..192 CDD:340717 65/96 (68%)
FERM_M 190..306 CDD:459788 83/115 (72%)
FERM_C_FRMD1_FRMD6 299..407 CDD:270006 69/107 (64%)
Frmd1XP_063136953.1 None

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